Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_M07
(681 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces ... 121 8e-29
SPBC2A9.09 |||phosducin family protein|Schizosaccharomyces pombe... 36 0.005
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 35 0.009
SPBP8B7.05c |||carbonic anhydrase |Schizosaccharomyces pombe|chr... 30 0.27
SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating |S... 29 0.62
SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|c... 29 0.82
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 28 1.1
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 27 1.9
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 27 3.3
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 26 4.4
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 26 4.4
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 26 5.8
>SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 279
Score = 121 bits (292), Expect = 8e-29
Identities = 63/174 (36%), Positives = 98/174 (56%), Gaps = 2/174 (1%)
Frame = +1
Query: 166 VDQLLQHVAQNVERQIDSEIER--LDALESGDLEAIRQQRIAEMKLRAKQKQEWLAIGHG 339
VD A + DSE+E L+ D A R+QR+ +K + + GH
Sbjct: 76 VDLYADTYATQAATESDSELEDALFSQLDEFDDTAYREQRLEMLKKEFARVEAAKEKGHM 135
Query: 340 EYTEIDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERA 519
++ ++ E+E S+ VV HFY D RCKI+D HL+ +AK H ET+F++++ A
Sbjct: 136 QFLTVENEREVMDFTLSSKKVVIHFYHPDFIRCKIIDSHLEKIAKVHWETKFIRIEAANA 195
Query: 520 PFLTGRLKIRVIPTLGLVKDNKTKDFIVGFTDLGNRDDFSTDILEWRIAXSEAI 681
PFL +L ++V+P + +++ D I+GF DLGN+DDF T +LE+R+ S AI
Sbjct: 196 PFLVVKLGLKVLPAVLCYVNSQLVDKIIGFADLGNKDDFETSLLEFRLLKSSAI 249
>SPBC2A9.09 |||phosducin family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 233
Score = 35.9 bits (79), Expect = 0.005
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 4/163 (2%)
Frame = +1
Query: 178 LQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQ--EWLAIGHGEYT- 348
L H + + +D E D + L+ R +R+ E K + + + I EYT
Sbjct: 40 LAHENRLENKDLDELAELEDEEDDEFLQMYRNKRMQEWKDQMSKAKFGSVYPISKPEYTA 99
Query: 349 EI-DGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPF 525
E+ D KE F VV H ++ P CK++ L+ LA + + +FVK+ ++A
Sbjct: 100 EVTDASKEVF--------VVVHMFQDSLPACKLLAAILERLAPMYPQIKFVKIPGKQA-- 149
Query: 526 LTGRLKIRVIPTLGLVKDNKTKDFIVGFTDLGNRDDFSTDILE 654
++PTL + + I+ LG + D+ E
Sbjct: 150 -VENYPEAMMPTLLIYGHGDLQQQILTLATLGGMNTSVVDVAE 191
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 35.1 bits (77), Expect = 0.009
Identities = 17/86 (19%), Positives = 41/86 (47%)
Frame = +1
Query: 349 EIDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFL 528
++ EF ++ + + VV F+ + CK + + + + + F+K+DV++ +
Sbjct: 4 QVSDSSEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFIKVDVDQLSEI 63
Query: 529 TGRLKIRVIPTLGLVKDNKTKDFIVG 606
+ +P+ L K+ + + IVG
Sbjct: 64 AAEAGVHAMPSFFLYKNGEKIEEIVG 89
>SPBP8B7.05c |||carbonic anhydrase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 30.3 bits (65), Expect = 0.27
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 163 NVDQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAK 306
N++ LL H +++ I+ E LDA+E L R+ ++AE+ RA+
Sbjct: 148 NLNNLLDHWLRHIRDVIEDNREELDAIEDPQL---RRLKLAELNTRAQ 192
>SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 29.1 bits (62), Expect = 0.62
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +3
Query: 288 NEVKSKAETRVVGHWSRRIHRDRWRERVLCCLQ*KSECRVPFLQVGLAPLQDRGHAPQDL 467
NE K K+ +VG S + ++ +C L K+ V +L GLAPL ++G D
Sbjct: 48 NEAKGKS---IVGAHSLEEFVSKLKKPRVCILLVKAGKPVDYLIEGLAPLLEKGDIIVDG 104
Query: 468 GQEAHRDEVR 497
G + D R
Sbjct: 105 GNSHYPDTTR 114
>SPBC36B7.05c |||phosphatidylinositol|Schizosaccharomyces pombe|chr
2|||Manual
Length = 279
Score = 28.7 bits (61), Expect = 0.82
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 330 WSRRIHRDRWRERVLCCLQ*KSECRVPFLQVGLAPLQDRGHAPQDL 467
W RR H RW ++ C S ++P V + P +D PQD+
Sbjct: 42 WFRRRHHCRWCGKLFCYNCCNSFAKLPVSSVSVDPTEDL--IPQDM 85
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/68 (22%), Positives = 34/68 (50%)
Frame = +1
Query: 403 VCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKDN 582
V FY CK + L+ L++++ + F+ ++ ++ + + + +PT+ L +
Sbjct: 39 VVDFYADWCGPCKYLKPFLEKLSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRKG 98
Query: 583 KTKDFIVG 606
+ D IVG
Sbjct: 99 QELDRIVG 106
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 172 QLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQ 315
QL A +ERQ + + ALE+ + QQRIA+ +L +Q Q
Sbjct: 360 QLAAQQAAEMERQRMAAQQHQQALEAIQMAQAEQQRIAQEQLAQQQFQ 407
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 352 SLC--ILRDQWPTTLVSALLLTSFQLCVVV*SPLDPHSPE 239
S+C ILRDQW L + +L S + +P DP PE
Sbjct: 83 SICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 26.2 bits (55), Expect = 4.4
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 169 DQLLQHVAQNVERQIDSEIERLDALESGDLEAI--RQQRIAEMKLRAKQKQEW 321
D ++ H R+ID + LDA+ EAI R +R E +L AK ++ W
Sbjct: 869 DPIVIHAYLKKRREIDEQSTALDAVVPTGDEAIDRRNRRRLEQEL-AKSQKNW 920
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = +1
Query: 388 KSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLG 567
K Q ++ +FY + CK ++ AK F+K++ E+ + + +P
Sbjct: 19 KEQIILLNFYAPWAAPCKQMNQVFDQFAKDTKNAVFLKIEAEKFSDIAESFDVNAVPLFV 78
Query: 568 LVKDNKTKDFIVG 606
L+ K I G
Sbjct: 79 LIHGAKVLARISG 91
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/66 (19%), Positives = 35/66 (53%)
Frame = +1
Query: 169 DQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQEWLAIGHGEYT 348
+QLL + ++++I + +++LES +L + ++I ++ R + ++ L G+
Sbjct: 750 EQLLVEKIEGIKKRILLKRREVNSLESQELSVLDTEKIQTLERRISETEKELESYAGQLQ 809
Query: 349 EIDGEK 366
+ E+
Sbjct: 810 DAKNEE 815
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,671,664
Number of Sequences: 5004
Number of extensions: 53186
Number of successful extensions: 160
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 313902888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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