Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_M07
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00048-9|AAB53824.1| 208|Caenorhabditis elegans Hypothetical pr... 174 4e-44
AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical ... 44 1e-04
U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical pr... 33 0.19
U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical pr... 33 0.19
DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein. 33 0.19
DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein. 33 0.19
AL132865-5|CAB60597.1| 258|Caenorhabditis elegans Hypothetical ... 33 0.19
AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical ... 32 0.44
AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin pro... 29 4.1
Z81496-6|CAB04070.2| 313|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 28 7.1
U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical p... 28 7.1
U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical p... 28 7.1
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 27 9.4
>U00048-9|AAB53824.1| 208|Caenorhabditis elegans Hypothetical
protein C05D11.3 protein.
Length = 208
Score = 174 bits (424), Expect = 4e-44
Identities = 85/171 (49%), Positives = 118/171 (69%)
Frame = +1
Query: 169 DQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQEWLAIGHGEYT 348
+QLL+ AQ VE QID E+ +L+ LE DLE IR+QR+ +MK K + E L+ GHG+Y
Sbjct: 11 EQLLR-AAQVVEEQIDQEMNKLENLEEDDLEVIRRQRMEQMKKAQKDRIEMLSHGHGKYE 69
Query: 349 EIDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFL 528
E+ EKEFF KS VVC FY + RCKIVD H +ILA+KH+ TRF+ ++ E+ FL
Sbjct: 70 EVADEKEFFEATKKSDKVVCLFYLPGNFRCKIVDKHFEILARKHVGTRFIHVNAEKVHFL 129
Query: 529 TGRLKIRVIPTLGLVKDNKTKDFIVGFTDLGNRDDFSTDILEWRIAXSEAI 681
T RL IRVIP++ +V +T D+I GF +LG +D+F+T+ +E R+A SE +
Sbjct: 130 TTRLNIRVIPSIAIVVKQQTVDYIRGFDELGGKDEFTTETMENRLARSEVL 180
>AF125951-5|AAL27238.1| 345|Caenorhabditis elegans Hypothetical
protein D2063.3a protein.
Length = 345
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 349 EIDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLK-ILAKKHIETRFVKLDVERAPF 525
EI +E A + V HFY S +P C+ V+ L +LA+ + R +D E P
Sbjct: 5 EIKSGEEVAAFIKEPSPAVLHFYASWAPSCEQVNQLLDDLLAEIALPLRAAFIDAEALPG 64
Query: 526 LTGRLKIRVIPTLGLVKDNKTKDFIVGF 609
++ KI PTL + K D I GF
Sbjct: 65 ISLNFKITAAPTLVFFSNGKEVDRIDGF 92
>AF125951-4|AAT68898.1| 342|Caenorhabditis elegans Hypothetical
protein D2063.3b protein.
Length = 342
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 349 EIDGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLK-ILAKKHIETRFVKLDVERAPF 525
EI +E A + V HFY S +P C+ V+ L +LA+ + R +D E P
Sbjct: 5 EIKSGEEVAAFIKEPSPAVLHFYASWAPSCEQVNQLLDDLLAEIALPLRAAFIDAEALPG 64
Query: 526 LTGRLKIRVIPTLGLVKDNKTKDFIVGF 609
++ KI PTL + K D I GF
Sbjct: 65 ISLNFKITAAPTLVFFSNGKEVDRIDGF 92
>U23168-7|AAC38808.1| 115|Caenorhabditis elegans Hypothetical
protein B0228.5a protein.
Length = 115
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +1
Query: 400 VVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKD 579
++ FY + CK + K LA H F K+DV+ A L + ++++PT K+
Sbjct: 30 IILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKN 89
Query: 580 NKTKDFIVG 606
+ + G
Sbjct: 90 GDAIEALEG 98
>U23168-6|AAP86623.1| 114|Caenorhabditis elegans Hypothetical
protein B0228.5b protein.
Length = 114
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +1
Query: 400 VVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKD 579
++ FY + CK + K LA H F K+DV+ A L + ++++PT K+
Sbjct: 29 IILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKN 88
Query: 580 NKTKDFIVG 606
+ + G
Sbjct: 89 GDAIEALEG 97
>DQ241300-1|ABB45864.1| 114|Caenorhabditis elegans TRX-1b protein.
Length = 114
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +1
Query: 400 VVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKD 579
++ FY + CK + K LA H F K+DV+ A L + ++++PT K+
Sbjct: 29 IILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKN 88
Query: 580 NKTKDFIVG 606
+ + G
Sbjct: 89 GDAIEALEG 97
>DQ241299-1|ABB45863.1| 115|Caenorhabditis elegans TRX-1a protein.
Length = 115
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +1
Query: 400 VVCHFYKSDSPRCKIVDMHLKILAKKHIETRFVKLDVERAPFLTGRLKIRVIPTLGLVKD 579
++ FY + CK + K LA H F K+DV+ A L + ++++PT K+
Sbjct: 30 IILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKN 89
Query: 580 NKTKDFIVG 606
+ + G
Sbjct: 90 GDAIEALEG 98
>AL132865-5|CAB60597.1| 258|Caenorhabditis elegans Hypothetical
protein Y62E10A.8 protein.
Length = 258
Score = 33.1 bits (72), Expect = 0.19
Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Frame = +1
Query: 121 LNQYKSS*KLNTMANVDQLLQHVAQNVER--QIDSEIERLDALESGDLEAIRQQRIAEMK 294
LN++K+ + +A V+ Q + + ++ I S+ ER A D + + + +K
Sbjct: 55 LNEFKAFREQTRLA-VESKNQKLIEQAKKGMMIGSKEEREKAQREDDEDEDFEMTLEGLK 113
Query: 295 LRAKQKQEWLAIGHGEYTEIDGEKEFF-AVCNKSQNVVCHF-YKSDSPRCKIVDMHLKIL 468
AK+ +E I E+ +K++ AV S ++C Y+ +S C+ + +KIL
Sbjct: 114 --AKRLREMRKIAANRVIEMTDKKQYSDAVDGSSSYLLCVLIYEPESDECEYLTRIVKIL 171
Query: 469 AKKHIETRFVK 501
A +T+FV+
Sbjct: 172 AADCPKTKFVR 182
>AF106589-2|AAC78230.1| 107|Caenorhabditis elegans Hypothetical
protein Y44E3A.3 protein.
Length = 107
Score = 31.9 bits (69), Expect = 0.44
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 355 DGEKEFFAVCNKSQNVVCHFYKSDSPRCKIVDMHLKILAKKHIET-RFVKLDVERAPFLT 531
D K FA K+Q V+ F S C+++ ++ LA +H + +K+DV+ +
Sbjct: 9 DEFKTIFAE-KKTQPVILFFTASWCGPCQMIKPRVEELAAEHKDRLSILKIDVDECDGVG 67
Query: 532 GRLKIRVIPTLGLVKDNKTKDFIVG 606
+I +PT L+ D KD G
Sbjct: 68 EEYEINSMPTFLLIVDGIKKDQFSG 92
>AF016447-16|AAG24016.1| 170|Caenorhabditis elegans Ferritin
protein 1 protein.
Length = 170
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 169 DQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQEW 321
D L+++A+ + Q D E R A E ++A+R R+A ++ +K EW
Sbjct: 41 DIALRNIAKFFKEQSDEE--RGHATELMRIQAVRGGRVAMQNIQKPEKDEW 89
>Z81496-6|CAB04070.2| 313|Caenorhabditis elegans Hypothetical
protein F09C6.2 protein.
Length = 313
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 46 FFLKEILKFTTLKSLIK*HFDKTHYLNQYKSS*KLNTMANVD 171
F +E+ L S++ HF+ +L+Q+K+S LN N+D
Sbjct: 153 FDAQELQIIDLLTSVLASHFELITHLSQWKNSKSLNFPRNID 194
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
protein C03D6.4 protein.
Length = 1390
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 181 QHVAQNVERQIDSEIERLDALESGD--LEAIRQQRIAEMKLRAKQKQEWLAIGHGEYTE 351
QH + ++ +ID ++E + +E G+ LE +R E +R + + + +G+Y E
Sbjct: 616 QHTVKEMDFEIDEKMELVAGVEDGNQVLEKLRNMSETEKLMRFNKLETAADLLNGKYEE 674
>U70849-11|AAK29800.1| 897|Caenorhabditis elegans Hypothetical
protein F29B9.2b protein.
Length = 897
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/53 (28%), Positives = 34/53 (64%)
Frame = +1
Query: 160 ANVDQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQE 318
A V+++ + ++ R++D+E+ER +A+ SG E I++ + + + K+K+E
Sbjct: 827 ARVEEIPEKATKSF-RELDNELERCEAVHSG--EKIKKVKEPKPPKQPKEKKE 876
>U70849-10|AAK29799.1| 910|Caenorhabditis elegans Hypothetical
protein F29B9.2a protein.
Length = 910
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/53 (28%), Positives = 34/53 (64%)
Frame = +1
Query: 160 ANVDQLLQHVAQNVERQIDSEIERLDALESGDLEAIRQQRIAEMKLRAKQKQE 318
A V+++ + ++ R++D+E+ER +A+ SG E I++ + + + K+K+E
Sbjct: 840 ARVEEIPEKATKSF-RELDNELERCEAVHSG--EKIKKVKEPKPPKQPKEKKE 889
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 349 LCILRDQWPTTLVSALLLTSFQLCVVV*SPLDP 251
L IL+DQW +L +L S Q + P DP
Sbjct: 93 LDILKDQWAASLTLRTVLLSIQALMCTPEPKDP 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,899,051
Number of Sequences: 27780
Number of extensions: 308151
Number of successful extensions: 944
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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