Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_M06
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   1.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   1.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   1.5  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    23   2.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.0  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    23   2.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.7  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   8.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   8.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   8.2  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   8.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.2  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   8.2  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -3

Query: 269 LAQQHQLELADFCLWSAIGPLCGSGPVCRH 180
           L+Q H L    FC      P CG   +C H
Sbjct: 541 LSQIHDLSPDQFCNGDNRPPDCGQNCMCTH 570



 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 346 GLRSSPRPFDSTTPPLNSRSGIQLDRRGI 432
           G+  SP   D     +N +  + LDRRG+
Sbjct: 608 GIGRSP---DQNVKKINLKHALDLDRRGL 633


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +2

Query: 503 HIRSRQELGEGTPTAGLSVDSDRSGGQQERPR 598
           +++   E  E  PT    +    S  + ERPR
Sbjct: 79  NVKKEDESDEEKPTTSFKLKDSSSDSEDERPR 110


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = -3

Query: 269 LAQQHQLELADFCLWSAIGPLCGSGPVCRHIPPCYCSSVLNFFLGDR 129
           L+Q+HQ++   FC  S++         C H+      +V+   L D+
Sbjct: 478 LSQRHQIDAKMFCNESSVSNCENEYCECTHVVNIPLGTVVEMVLIDK 524


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 240 CQFKLVLLGESAVGKSSLVLRFVKGQF 320
           C+  L LL    VGK   + RF++G +
Sbjct: 99  CRSALALLLSPEVGKDHRIKRFLRGVY 125


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -2

Query: 489 CHILQ*RIGLLCSTSALSCDTSPVQ 415
           CH      G  C T    CD++P Q
Sbjct: 170 CHCSDGYSGSYCQTEINECDSAPCQ 194


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 218 IGPLCGSGPVCRHIPPCYCSS 156
           +GP+C S  +  H+   Y  S
Sbjct: 257 LGPVCNSNNIWLHVDAAYAGS 277


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -1

Query: 322 WNCPLTNRSTSEDLPTADSPNNTSL 248
           WN P+  +S  +   ++D PN T L
Sbjct: 756 WNYPVCWQSNCKKGASSDKPNFTKL 780


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -1

Query: 397 NLTVVSSNRMAWVR 356
           NL V SSNR  W R
Sbjct: 64  NLVVTSSNRPWWER 77


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -1

Query: 397 NLTVVSSNRMAWVR 356
           NL V SSNR  W R
Sbjct: 65  NLVVTSSNRPWWER 78


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -1

Query: 397 NLTVVSSNRMAWVR 356
           NL V SSNR  W R
Sbjct: 65  NLVVTSSNRPWWER 78


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +1

Query: 13  WSFWISCSRFS 45
           W  W+ C+R+S
Sbjct: 190 WPAWVYCTRYS 200


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = +3

Query: 315 QFHEYQESTIGAAFLTQAIRFDDTTVKFEIWDTA 416
           Q H  ++  +G      + +FD+T++   +W  A
Sbjct: 539 QLHLNKKQILGGEACLWSEQFDETSLDTRLWPRA 572


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 354 FLTQAIRFDDTTVKF 398
           FLT  +R  D T+KF
Sbjct: 658 FLTPNMRVQDVTIKF 672


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,213
Number of Sequences: 336
Number of extensions: 3306
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)