Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_M06
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.           255   1e-69
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    57   5e-10
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    26   0.84 
AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    25   1.5  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     25   1.5  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    25   1.9  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   3.4  
AM085517-1|CAJ30215.1|  339|Anopheles gambiae putative angiotens...    24   4.5  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       23   5.9  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    23   5.9  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    23   5.9  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score =  255 bits (624), Expect = 1e-69
 Identities = 121/139 (87%), Positives = 128/139 (92%)
 Frame = +3

Query: 198 GAAQRPNGAPQTKVCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQAIRF 377
           GAAQRPNGA Q K+CQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ +  
Sbjct: 9   GAAQRPNGATQNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCI 68

Query: 378 DDTTVKFEIWDTAGQERYHSLAPMYYRGAQSAIVVYDITNQDTFGRAKNWVKELQRQASP 557
           DDTTVKFEIWDTAGQERYHSLAPMYYRGAQ+AIVVYDI N D+F RAK WVKELQRQASP
Sbjct: 69  DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASP 128

Query: 558 SIVIALAGNKSDLAXKRMV 614
           +IVIALAGNK+DLA  R+V
Sbjct: 129 NIVIALAGNKADLANSRVV 147


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 56.8 bits (131), Expect = 5e-10
 Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
 Frame = +3

Query: 249 KLVLLGESAVGKSSLVLRFVKGQFH-EYQESTIGAAFLTQAIRFDDTTVKFEIWDTAGQE 425
           K V++G+  VGK+ +++ +    F  EY  ++         +  D   V   +WDTAGQE
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVV--DGVQVSLGLWDTAGQE 65

Query: 426 RYHSLAPMYYRGAQSAIVVYDITNQDTFGR-AKNWVKELQRQASPSIVIALAGNKSDLAX 602
            Y  L P+ Y      ++ Y + +  +F      W  E++    P   I L G K DL  
Sbjct: 66  DYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHC-PDAPIILVGTKIDLRE 124

Query: 603 KR 608
            R
Sbjct: 125 DR 126


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 26.2 bits (55), Expect = 0.84
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 260 QHQLELADFCLWSAIGPLCGSGPVCRHIPPCYC 162
           Q++ EL + C+  ++G    +GP+C     C C
Sbjct: 511 QNRRELFEQCVAPSVGDELRTGPICSDRGECIC 543


>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -3

Query: 182 HIPPCYCSSVLNFFLGDRSSRSRRDTEIIINYTLKQI*SLIVN 54
           ++PP YC S+   FLG  S+ +   +E++  +  K++  L++N
Sbjct: 43  YVPPLYCDSLSQSFLG--STINGNSSELLKRWRGKRV--LVLN 81


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 349 LRSSPRPFDSTTPPLNSRSGIQL 417
           LRS P+ FD+ T  L SRS  +L
Sbjct: 16  LRSLPKAFDALTTALESRSDKEL 38


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 346 GLRSSPRPFDSTTPPLNSRSGIQLDRRGI 432
           G+  SP   DST   +N R  + LDRRG+
Sbjct: 650 GMGRSP---DSTVKKINLRHTLDLDRRGL 675


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 278 YRRLAQQHQLELADF 234
           Y +L Q+H+ ELADF
Sbjct: 686 YSQLIQEHEKELADF 700


>AM085517-1|CAJ30215.1|  339|Anopheles gambiae putative angiotensin
           converting enzymeprecursor protein.
          Length = 339

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 134 RPRKSSERSYNNREGYGDKQDRSRTEAQWR 223
           R R+ S  SYN+R  YG  +   R + + R
Sbjct: 111 RDRQDSPYSYNDRNRYGGDRGYDRNQNRER 140


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 28 SCSRFSSFTFTINDYIC 78
          SC RF   TFT  D  C
Sbjct: 15 SCQRFKGSTFTTKDDYC 31


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 307 TNRSTSEDLPTADSPNNTSLNWQTFVC 227
           T+     ++ TA+ PNN    ++TF C
Sbjct: 107 TSECLERNVHTAELPNNCCQAYETFQC 133


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 307 TNRSTSEDLPTADSPNNTSLNWQTFVC 227
           T+     ++ TA+ PNN    ++TF C
Sbjct: 107 TSECLERNVHTAELPNNCCQAYETFQC 133


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,178
Number of Sequences: 2352
Number of extensions: 14668
Number of successful extensions: 53
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)