Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_M05
         (790 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   6.4  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   6.4  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   6.4  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   6.4  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   6.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.5  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = -3

Query: 578 SYDHMRYCFSIASSRIFCFNRC*LSYFTLIYFFGFTYTQAYSTSKILH*YLCFLDLCAVN 399
           +++H    F ++ ++ FC     L Y ++ +F         +TS +L      +  CA  
Sbjct: 27  NFNHRESYFRLSKAKSFCTFVAALVYCSVTFFALSELLTDLATSILLKVSSLLIGFCASI 86

Query: 398 FTTNHWTERNLS-SKFL 351
           +    W   +++ +KF+
Sbjct: 87  YVGTVWINTSINGTKFI 103


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 583 KRPRVPNNLNLIQLYMNRYKRK 648
           K+P +   LN   LYM   + K
Sbjct: 475 KKPHIKKPLNAFMLYMKEMRAK 496


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 583 KRPRVPNNLNLIQLYMNRYKRK 648
           K+P +   LN   LYM   + K
Sbjct: 367 KKPHIKKPLNAFMLYMKEMRAK 388


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 544 PPAGFSVSTGVNSVTSPSYTSLV 476
           PP   S S   ++  SPS T+L+
Sbjct: 318 PPEPISASLSTSNSNSPSSTNLI 340


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 781 TSPLGSGTYXSASRSNSVAKVSLXP 707
           +SP+ SG+Y   S +  + +  L P
Sbjct: 136 SSPMSSGSYDPYSPNGKIGREDLSP 160


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 561 ILFFHSLQQDFLFQQVLTQ 505
           + FFHS     LF QV ++
Sbjct: 97  LFFFHSFMTSVLFSQVASR 115


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 544 PPAGFSVSTGVNSVTSPSYTSLV 476
           PP   S S   ++  SPS T+L+
Sbjct: 107 PPEPISASLSTSNSNSPSSTNLI 129


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 544 PPAGFSVSTGVNSVTSPSYTSLV 476
           PP   S S   ++  SPS T+L+
Sbjct: 107 PPEPISASLSTSNSNSPSSTNLI 129


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 137 LRFSCAFHXFNFHV 96
           L F CAF  FN H+
Sbjct: 180 LLFCCAFIFFNMHL 193


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,151
Number of Sequences: 336
Number of extensions: 3552
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)