Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_M03
         (514 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3LTI0 Cluster: Predicted protein; n=2; Saccharomycetac...    36   0.54 
UniRef50_Q5N7B9 Cluster: Putative uncharacterized protein P0489B...    33   5.0  
UniRef50_Q8SRK1 Cluster: HISTONE ACETYLTRANSFERASE TYPE B SUBUNI...    33   5.0  
UniRef50_A6WEQ5 Cluster: Transcriptional regulator, TetR family;...    32   6.7  
UniRef50_A5BBK1 Cluster: Putative uncharacterized protein; n=1; ...    32   6.7  
UniRef50_Q4Q1F9 Cluster: Putative uncharacterized protein; n=3; ...    32   6.7  
UniRef50_Q962N9 Cluster: Putative uncharacterized protein; n=1; ...    32   8.8  
UniRef50_Q4PFY6 Cluster: Putative uncharacterized protein; n=1; ...    32   8.8  

>UniRef50_A3LTI0 Cluster: Predicted protein; n=2;
           Saccharomycetaceae|Rep: Predicted protein - Pichia
           stipitis (Yeast)
          Length = 596

 Score = 35.9 bits (79), Expect = 0.54
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -1

Query: 343 SNRNRNKRVIMSVQRLPRTPPPLWAARYGNCGRGMFPTPSMDQK 212
           SN   N+RV  SV+RL   P P   +  G+ G  +  TPS DQ+
Sbjct: 279 SNNFSNQRVRQSVRRLSHLPAPRRPSMIGSIGTSLLSTPSEDQE 322


>UniRef50_Q5N7B9 Cluster: Putative uncharacterized protein
           P0489B03.36; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0489B03.36 - Oryza sativa subsp. japonica (Rice)
          Length = 142

 Score = 32.7 bits (71), Expect = 5.0
 Identities = 21/63 (33%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
 Frame = +2

Query: 167 GGDGGC---VVLTEQAAALLVHARSREHPATAISVASSPXRRWSARQTLHRHNDAFISVP 337
           GG GGC   V  T    A     RS +   +  S  SS  RR    +  H H DAF +  
Sbjct: 33  GGGGGCSRAVAATANGRADAASRRSGDEAPSGRSYGSSSSRRRDGSRHAHAHRDAFAAAA 92

Query: 338 VRL 346
             L
Sbjct: 93  AYL 95


>UniRef50_Q8SRK1 Cluster: HISTONE ACETYLTRANSFERASE TYPE B SUBUNIT
           2; n=1; Encephalitozoon cuniculi|Rep: HISTONE
           ACETYLTRANSFERASE TYPE B SUBUNIT 2 - Encephalitozoon
           cuniculi
          Length = 384

 Score = 32.7 bits (71), Expect = 5.0
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +2

Query: 152 ELLDPGGDGGCVVLTEQAAALLVHARSREHPATAISVASSP 274
           +LL   GDGG VVL +  +   +HA    H +  +SV  SP
Sbjct: 219 KLLSSAGDGGMVVLWDTRSEDCIHAIEEAHTSDILSVRFSP 259


>UniRef50_A6WEQ5 Cluster: Transcriptional regulator, TetR family;
           n=1; Kineococcus radiotolerans SRS30216|Rep:
           Transcriptional regulator, TetR family - Kineococcus
           radiotolerans SRS30216
          Length = 208

 Score = 32.3 bits (70), Expect = 6.7
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 342 LTGTEINASLCRCSVCRALHRRXGLLATEIAVAGC 238
           +TG  ++      +V R+LHRR GLL   +  AGC
Sbjct: 122 ITGNALHDEALAAAVRRSLHRRTGLLEAALVRAGC 156


>UniRef50_A5BBK1 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 276

 Score = 32.3 bits (70), Expect = 6.7
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -1

Query: 283 PPLWAARYGNCGRGMFPTPSMDQKSCSLFCKYDAATVSTG 164
           PP+ A  Y +CG G+F  P   Q   S +C Y    +S G
Sbjct: 28  PPITARPYFSCGGGVFRYPFWHQDQPSGYCGYPGFGISCG 67


>UniRef50_Q4Q1F9 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 1725

 Score = 32.3 bits (70), Expect = 6.7
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +2

Query: 203 AAALLVHARSREHPATAISVASSPXRRWSA 292
           AAA++ H+R RE PA A++ A SP    +A
Sbjct: 88  AAAMMPHSRKRERPAVALASAGSPTSTTAA 117


>UniRef50_Q962N9 Cluster: Putative uncharacterized protein; n=1;
           Leishmania donovani|Rep: Putative uncharacterized
           protein - Leishmania donovani
          Length = 116

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -1

Query: 319 VIMSVQRLPRTPPPLWAARYGNCGRGMFPTPSMDQKSC 206
           V+M + R PR  P +W  R+    +G+ P PS     C
Sbjct: 44  VVMQLLRHPRGGPAVWGPRWPEHRKGLSPRPSSKHAQC 81


>UniRef50_Q4PFY6 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 232

 Score = 31.9 bits (69), Expect = 8.8
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = +3

Query: 99  RDGGTRLLRSPXIPRQLSNSSIPVETVAASYLQNKLQLFWSMLGVGNIPRP 251
           R G   ++RSP   R  S ++IP ETVAA+ +   + +     G GN+  P
Sbjct: 30  RGGAGNIIRSPSRSRDRSGNAIPRETVAAAAVPGHM-ISSGRGGAGNVRSP 79


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 309,952,129
Number of Sequences: 1657284
Number of extensions: 4916208
Number of successful extensions: 14421
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14419
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)