Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_M03
         (514 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven thro...    29   9.5  
AY358124-1|AAQ88491.1| 1092|Homo sapiens SEMA5B protein.               29   9.5  
AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein.     29   9.5  

>BC077726-1|AAH77726.1| 1151|Homo sapiens sema domain, seven
           thrombospondin repeats (type 1 and type 1-like),
           transmembra protein.
          Length = 1151

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -2

Query: 345 NLTGTEINASLCRCSVCRALHRRXG---LLATEIAVAGCSRLRAWT 217
           +L G    + LCR   C +   R G    L   I +A CSR  AWT
Sbjct: 623 HLDGDNSGSCLCRARSCDSPRPRCGGLDCLGPAIHIANCSRNGAWT 668


>AY358124-1|AAQ88491.1| 1092|Homo sapiens SEMA5B protein.
          Length = 1092

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -2

Query: 345 NLTGTEINASLCRCSVCRALHRRXG---LLATEIAVAGCSRLRAWT 217
           +L G    + LCR   C +   R G    L   I +A CSR  AWT
Sbjct: 623 HLDGDNSGSCLCRARSCDSPRPRCGGLDCLGPAIHIANCSRNGAWT 668


>AB040878-1|BAA95969.1| 1202|Homo sapiens KIAA1445 protein protein.
          Length = 1202

 Score = 29.1 bits (62), Expect = 9.5
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -2

Query: 345 NLTGTEINASLCRCSVCRALHRRXG---LLATEIAVAGCSRLRAWT 217
           +L G    + LCR   C +   R G    L   I +A CSR  AWT
Sbjct: 674 HLDGDNSGSCLCRARSCDSPRPRCGGLDCLGPAIHIANCSRNGAWT 719


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,599,006
Number of Sequences: 237096
Number of extensions: 764190
Number of successful extensions: 1893
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1893
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)