Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_M02
         (737 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   5.6  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   7.4  
AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B...    23   9.8  
AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B...    23   9.8  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -1

Query: 710 RQSCPCQRTNRNYS*KLLCQFCG*QIC 630
           R SC C++  +      LC F G  +C
Sbjct: 463 RTSCNCEKNKKPMELSELCNFNGDYVC 489


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = -2

Query: 718 YTIDSL---VPANEQTEIIHENYYVS 650
           YT+D L   VP N Q   +++NY  S
Sbjct: 175 YTLDDLSNTVPVNTQYNALNDNYVTS 200


>AY545988-1|AAS99341.1|  423|Anopheles gambiae carboxypeptidase B
           precursor protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 64  KNIKKKLEQHDINNDL 111
           K +++ LEQHDI  DL
Sbjct: 74  KRVEEFLEQHDIEYDL 89


>AJ627286-1|CAF28572.1|  423|Anopheles gambiae carboxypeptidase B
           protein.
          Length = 423

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 64  KNIKKKLEQHDINNDL 111
           K +++ LEQHDI  DL
Sbjct: 74  KRVEEFLEQHDIEYDL 89


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,199
Number of Sequences: 2352
Number of extensions: 16855
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)