Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_M01
         (491 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC070104-1|AAH70104.1|  707|Homo sapiens KIAA1841 protein.             29   6.6  
BC039298-1|AAH39298.1|  572|Homo sapiens KIAA1841 protein protein.     29   8.8  
AK131267-1|BAD18445.1|  379|Homo sapiens protein ( Homo sapiens ...    29   8.8  

>BC070104-1|AAH70104.1|  707|Homo sapiens KIAA1841 protein.
          Length = 707

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
 Frame = +3

Query: 267 DNDSPEIVYMNIPKYL--YITYNANNFEVSVKTLHC*LYSFLLIIKFVKRKLYETK 428
           D   P  + ++  KY   Y++ +A  +E    ++HC ++ F  +IK++KR   E+K
Sbjct: 161 DFTCPRDLLISEMKYFAEYLSMDAQRWEEVDISVHCDVHIFNWLIKYIKRNTKESK 216


>BC039298-1|AAH39298.1|  572|Homo sapiens KIAA1841 protein protein.
          Length = 572

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +3

Query: 267 DNDSPEIVYMNIPKYL--YITYNANNFEVSVKTLHC*LYSFLLIIKFVKRKLYETK 428
           D   P  + ++  KY   Y++ +A  +E    ++HC ++ F  +IK++KR   E K
Sbjct: 15  DFTCPRDLLISEMKYFAEYLSMDAQRWEEVDISVHCDVHIFNWLIKYIKRNTKENK 70


>AK131267-1|BAD18445.1|  379|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16202 fis, clone CTONG2015596. ).
          Length = 379

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +3

Query: 267 DNDSPEIVYMNIPKYL--YITYNANNFEVSVKTLHC*LYSFLLIIKFVKRKLYETK 428
           D   P  + ++  KY   Y++ +A  +E    ++HC ++ F  +IK++KR   E K
Sbjct: 161 DFTCPRDLLISEMKYFAEYLSMDAQRWEEVDISVHCDVHIFNWLIKYIKRNTKENK 216


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,339,848
Number of Sequences: 237096
Number of extensions: 1022918
Number of successful extensions: 1682
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)