Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_L24
(718 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 28 0.087
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 22 4.3
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 21 7.6
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 7.6
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 7.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.6
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 7.6
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 7.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.6
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 27.9 bits (59), Expect = 0.087
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 389 CSAGRVCEINEHGDAMCNCIKDCPYETDSRRMVCTNFNETWQSDCE 526
C G VC I++ G +C DCP T+ NE + C+
Sbjct: 385 CQNGGVCRISDGGGYIC----DCPSGTNGTNCEIDTINECDSNPCK 426
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/42 (26%), Positives = 16/42 (38%)
Frame = +2
Query: 446 IKDCPYETDSRRMVCTNFNETWQSDCEVYRQRCLCLDNSDQC 571
I DC C + +Q C+ + LC N+D C
Sbjct: 69 INDCKVNPCENGGTCVDKINAFQCICKEGWEGALCNINTDDC 110
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 21.4 bits (43), Expect = 7.6
Identities = 18/82 (21%), Positives = 35/82 (42%)
Frame = +3
Query: 417 TNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAYASTTLISAVVRNTTTF 596
++T P T++ T T T + + STKP N+ T + A ++ T +F
Sbjct: 157 SSTPLPPTTSTTTRTTLTTK--FTTKPSTKPTNKPVVVTKPPQAPPFATVGANLQATVSF 214
Query: 597 KSSITERAEKCLTALKAXCLTS 662
+++ + L L + + S
Sbjct: 215 GTNLVGGIVRSLGTLGSRVVES 236
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 263 SLDEKRYHEAEIARV 307
SLDEK+Y E+ RV
Sbjct: 334 SLDEKKYILQEVVRV 348
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 7.6
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = +3
Query: 381 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAY 548
+ A D S T T A V Q D W + G R+ ASDA+
Sbjct: 549 RGKALMDKSVMKKYT-TRSTQAKHYVQYDQGEDRWLCTLLLQRGYRVEYSAASDAF 603
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.6
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +3
Query: 468 QTPDAWCAQTSTKPGNRIAKYTASDAY 548
Q D W + G R+ ASDAY
Sbjct: 837 QGEDRWLCTLLLQRGYRVEYSAASDAY 863
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.6
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +3
Query: 468 QTPDAWCAQTSTKPGNRIAKYTASDAY 548
Q D W + G R+ ASDAY
Sbjct: 837 QGEDRWLCTLLLQRGYRVEYSAASDAY 863
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 7.6
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = +3
Query: 381 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAY 548
+ A D S T T A V Q D W + G R+ ASDA+
Sbjct: 782 RGKALMDKSVMKKYT-TRSTQAKHYVQYDQGEDRWLCTLLLQRGYRVEYSAASDAF 836
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 7.6
Identities = 16/56 (28%), Positives = 20/56 (35%)
Frame = +3
Query: 381 KSTAAQDVSAKSTNTETPCVTASRTVPTRQTPDAWCAQTSTKPGNRIAKYTASDAY 548
+ A D S T T A V Q D W + G R+ ASDA+
Sbjct: 782 RGKALMDKSVMKKYT-TRSTQAKHYVQYDQGEDRWLCTLLLQRGYRVEYSAASDAF 836
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.6
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +3
Query: 468 QTPDAWCAQTSTKPGNRIAKYTASDAY 548
Q D W + G R+ ASDAY
Sbjct: 837 QGEDRWLCTLLLQRGYRVEYSAASDAY 863
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.6
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +3
Query: 468 QTPDAWCAQTSTKPGNRIAKYTASDAY 548
Q D W + G R+ ASDAY
Sbjct: 837 QGEDRWLCTLLLQRGYRVEYSAASDAY 863
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,823
Number of Sequences: 336
Number of extensions: 3231
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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