Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_L17
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin ... 265 3e-71
Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical pr... 230 1e-60
AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical... 56 2e-08
U80444-3|AAB37789.1| 326|Caenorhabditis elegans Serpentine rece... 29 2.9
U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family pr... 29 5.0
Z66564-6|CAA91473.4| 737|Caenorhabditis elegans Hypothetical pr... 28 8.8
AY887904-1|AAX34416.1| 737|Caenorhabditis elegans anion transpo... 28 8.8
>U37429-15|AAN63412.1| 195|Caenorhabditis elegans Peroxiredoxin
protein 2 protein.
Length = 195
Score = 265 bits (649), Expect = 3e-71
Identities = 120/175 (68%), Positives = 142/175 (81%)
Frame = +3
Query: 267 TKAMISKPAPEWEATAVVNGEFTQLSLSSFKGKYLVFFFYPLDFTFVCPTEILAFSERIE 446
+KA I KPAP+++ AVV+GEF +SLS +KGKY+V FFYPLDFTFVCPTEI+AFS+R E
Sbjct: 2 SKAFIGKPAPQFKTQAVVDGEFVDVSLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRAE 61
Query: 447 EFRKINTEVVACSVDSHFTHLAWINTPRKEGGLGKINIPLLSDLTHSIAKDYGVYLEDLG 626
EF+ INT V+A S DS F+HLAWIN PRK GGLG++NIP+L+D H I++DYGV ED G
Sbjct: 62 EFKAINTVVLAASTDSVFSHLAWINQPRKHGGLGEMNIPVLADTNHQISRDYGVLKEDEG 121
Query: 627 HTLRGLFIIDDKGILRQITMNDLPVGRSVDETLRLVQAFQYTDNHGEVCPXGWKP 791
RGLFIID LRQIT+NDLPVGRSVDETLRLVQAFQ+ + HGEVCP GW P
Sbjct: 122 IAFRGLFIIDPSQNLRQITINDLPVGRSVDETLRLVQAFQFVEKHGEVCPAGWTP 176
>Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical
protein R07E5.2 protein.
Length = 226
Score = 230 bits (562), Expect = 1e-60
Identities = 100/164 (60%), Positives = 128/164 (78%)
Frame = +3
Query: 294 PEWEATAVVNGEFTQLSLSSFKGKYLVFFFYPLDFTFVCPTEILAFSERIEEFRKINTEV 473
P ++ TAVV+G+F +S +KGK+LV FFYPLDFTFVCPTEI+A+ +R EFR + EV
Sbjct: 40 PAFKGTAVVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCPTEIIAYGDRANEFRSLGAEV 99
Query: 474 VACSVDSHFTHLAWINTPRKEGGLGKINIPLLSDLTHSIAKDYGVYLEDLGHTLRGLFII 653
VACS DSHF+HLAW+NTPRK+GGLG ++IPLL+D IA +GV ++ G + RGLF+I
Sbjct: 100 VACSCDSHFSHLAWVNTPRKDGGLGDMDIPLLADFNKKIADSFGVLDKESGLSYRGLFLI 159
Query: 654 DDKGILRQITMNDLPVGRSVDETLRLVQAFQYTDNHGEVCPXGW 785
D G +R T NDLPVGRSVDETLR+++AFQ++D HGEVCP W
Sbjct: 160 DPSGTVRHTTCNDLPVGRSVDETLRVLKAFQFSDKHGEVCPADW 203
>AC024761-15|AAM97968.1| 231|Caenorhabditis elegans Hypothetical
protein Y38C1AA.11 protein.
Length = 231
Score = 56.4 bits (130), Expect = 2e-08
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 10/151 (6%)
Frame = +3
Query: 363 KYLVFFFYPLDFTFVCPTEILAFSERIEEFRKINTEVVACSVDSHFTHLAW---INTPRK 533
++L+ F +P DFT VC TE+ + EFRK + +++A S+DS TH W IN+ +
Sbjct: 29 QWLMLFSHPADFTPVCTTELAELVKLAPEFRKRHVQILAISIDSSETHRDWAKDINSVAQ 88
Query: 534 EGGLGK-INIPLLSDLTHSIAKDYGVY------LEDLGHTLRGLFIIDDKGILRQITMND 692
G + +++D SI + G+ E + + R + + L+ +
Sbjct: 89 LSNCGSHLPFEIIADTDRSICTELGMIDPDEMNSEGICLSARAVMLFGPDKKLKSKILYP 148
Query: 693 LPVGRSVDETLRLVQAFQYTDNHGEVCPXGW 785
GR+ E LR+V Q P W
Sbjct: 149 ATFGRNFVEILRMVDGVQLGTKAPVATPANW 179
>U80444-3|AAB37789.1| 326|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 14 protein.
Length = 326
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +3
Query: 330 FTQLSLSSFKGKYLVFFFYPLDFTFVCPT-EILAFSERIEEFRK-INTEVVACSVDSHF 500
F ++S +S LVF L FTF+C +L ER +E K I+ V S+ F
Sbjct: 193 FKKVSWASQSRFQLVFIIIALSFTFICTAITLLKLPERSKEIEKAISNATVIISIGFTF 251
>U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family
protein 2 protein.
Length = 423
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -3
Query: 241 RAPPGKTLPLP-NE*HESPSKSEDEQVITLK 152
++PPGKT LP + H S S SED++ TLK
Sbjct: 264 QSPPGKTASLPTHSPHPSESNSEDDEP-TLK 293
>Z66564-6|CAA91473.4| 737|Caenorhabditis elegans Hypothetical
protein F52D10.1 protein.
Length = 737
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 417 EILAFSERIEEFRKINTEVVACSVDSHFTHLAWINTPRKEGGLGKINIPLLSDLT 581
E+L +ER+E R TEV H A I+ + I + L SDL+
Sbjct: 3 ELLCRTERVEHARNFKTEVRGLMDVDHLIERACIHRNMNHSHIHTILLSLFSDLS 57
>AY887904-1|AAX34416.1| 737|Caenorhabditis elegans anion
transporter ABTS-2 protein.
Length = 737
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +3
Query: 417 EILAFSERIEEFRKINTEVVACSVDSHFTHLAWINTPRKEGGLGKINIPLLSDLT 581
E+L +ER+E R TEV H A I+ + I + L SDL+
Sbjct: 3 ELLCRTERVEHARNFKTEVRGLMDVDHLIERACIHRNMNHSHIHTILLSLFSDLS 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,385,125
Number of Sequences: 27780
Number of extensions: 355306
Number of successful extensions: 805
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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