Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_L14
(601 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-2292|AAN13727.1| 434|Drosophila melanogaster CG31268-P... 31 0.91
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 29 3.7
M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-relate... 29 3.7
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 29 3.7
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 29 3.7
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 29 3.7
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 29 3.7
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 29 3.7
AY051579-1|AAK93003.1| 631|Drosophila melanogaster GH22929p pro... 29 4.8
AF439752-1|AAL32055.1| 631|Drosophila melanogaster dopamine tra... 29 4.8
AF260833-1|AAF76882.1| 631|Drosophila melanogaster dopamine tra... 29 4.8
AE013599-2301|AAF57986.2| 631|Drosophila melanogaster CG8380-PA... 29 4.8
AY118656-1|AAM50025.1| 1242|Drosophila melanogaster SD07467p pro... 29 6.4
AE013599-1825|AAF58294.1| 1242|Drosophila melanogaster CG8241-PA... 29 6.4
U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type ... 28 8.4
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 28 8.4
>AE014297-2292|AAN13727.1| 434|Drosophila melanogaster CG31268-PA
protein.
Length = 434
Score = 31.5 bits (68), Expect = 0.91
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 167 PPSTESLPSGWLILGAPGESGACGSAGRNGRTARP 271
PP +P + GAPGE G G G +G+ RP
Sbjct: 75 PPGPPGIPGLPGVEGAPGEKGDRGDRGESGQRGRP 109
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 206 LGAPGESGACGSAGRNGRTARP 271
+GAPGE G G GR+GR P
Sbjct: 1427 VGAPGERGFTGPKGRDGRDGTP 1448
>M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-related
collagen protein.
Length = 421
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 206 LGAPGESGACGSAGRNGRTARP 271
+GAPGE G G GR+GR P
Sbjct: 73 VGAPGERGFTGPKGRDGRDGTP 94
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 206 LGAPGESGACGSAGRNGRTARP 271
+GAPGE G G GR+GR P
Sbjct: 1427 VGAPGERGFTGPKGRDGRDGTP 1448
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 206 LGAPGESGACGSAGRNGRTARP 271
+GAPGE G G GR+GR P
Sbjct: 1427 VGAPGERGFTGPKGRDGRDGTP 1448
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 206 LGAPGESGACGSAGRNGRTARP 271
+GAPGE G G GR+GR P
Sbjct: 1428 VGAPGERGFTGPKGRDGRDGTP 1449
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 206 LGAPGESGACGSAGRNGRTARP 271
+GAPGE G G GR+GR P
Sbjct: 1428 VGAPGERGFTGPKGRDGRDGTP 1449
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 206 LGAPGESGACGSAGRNGRTARP 271
+GAPGE G G GR+GR P
Sbjct: 1428 VGAPGERGFTGPKGRDGRDGTP 1449
>AY051579-1|AAK93003.1| 631|Drosophila melanogaster GH22929p
protein.
Length = 631
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 15 FCETLVAFRVNFLKNHIRAWSVKFF 89
+ L+AF V+F N I AWS++FF
Sbjct: 111 YAVVLIAFYVDFYYNVIIAWSLRFF 135
>AF439752-1|AAL32055.1| 631|Drosophila melanogaster dopamine
transporter protein.
Length = 631
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 15 FCETLVAFRVNFLKNHIRAWSVKFF 89
+ L+AF V+F N I AWS++FF
Sbjct: 111 YAVVLIAFYVDFYYNVIIAWSLRFF 135
>AF260833-1|AAF76882.1| 631|Drosophila melanogaster dopamine
transporter protein.
Length = 631
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 15 FCETLVAFRVNFLKNHIRAWSVKFF 89
+ L+AF V+F N I AWS++FF
Sbjct: 111 YAVVLIAFYVDFYYNVIIAWSLRFF 135
>AE013599-2301|AAF57986.2| 631|Drosophila melanogaster CG8380-PA
protein.
Length = 631
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 15 FCETLVAFRVNFLKNHIRAWSVKFF 89
+ L+AF V+F N I AWS++FF
Sbjct: 111 YAVVLIAFYVDFYYNVIIAWSLRFF 135
>AY118656-1|AAM50025.1| 1242|Drosophila melanogaster SD07467p
protein.
Length = 1242
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -1
Query: 418 VVGAWSWGPTSASPQVSGECGEVASAGPGTAQPGRV 311
V+G G T+ Q GECG A G QP RV
Sbjct: 607 VIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRV 642
>AE013599-1825|AAF58294.1| 1242|Drosophila melanogaster CG8241-PA
protein.
Length = 1242
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = -1
Query: 418 VVGAWSWGPTSASPQVSGECGEVASAGPGTAQPGRV 311
V+G G T+ Q GECG A G QP RV
Sbjct: 607 VIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRV 642
>U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type IV
alpha 2 protein.
Length = 1761
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 209 GAPGESGACGSAGRNGRTARPRP 277
GA GE G G G+NGR P P
Sbjct: 1366 GAKGEQGYPGLPGKNGRVGAPGP 1388
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +2
Query: 209 GAPGESGACGSAGRNGRTARPRP 277
GA GE G G G+NGR P P
Sbjct: 1368 GAKGEQGYPGLPGKNGRVGAPGP 1390
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,636,168
Number of Sequences: 53049
Number of extensions: 685126
Number of successful extensions: 2122
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2106
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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