Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_L12
(560 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 68 3e-11
CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 68 3e-11
BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 68 3e-11
BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 68 3e-11
AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 68 3e-11
CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 66 1e-10
AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 65 1e-10
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 31 3.7
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 31 3.7
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 31 3.7
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 31 3.7
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 31 3.7
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 31 3.7
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 31 3.7
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 31 3.7
AJ295991-1|CAC28351.1| 1388|Homo sapiens Putative Chromatin modu... 30 4.8
BC094825-1|AAH94825.2| 584|Homo sapiens Wolf-Hirschhorn syndrom... 29 8.5
AY196485-1|AAP33842.1| 246|Homo sapiens I-mfa domain-containing... 29 8.5
AL132868-4|CAM15221.1| 1365|Homo sapiens Wolf-Hirschhorn syndrom... 29 8.5
AL132868-3|CAM15220.1| 713|Homo sapiens Wolf-Hirschhorn syndrom... 29 8.5
AJ007042-1|CAB45386.1| 1365|Homo sapiens TRX5 protein protein. 29 8.5
AF330040-1|AAK00344.1| 584|Homo sapiens IL-5 promoter REII-regi... 29 8.5
AF178219-1|AAF23370.1| 1365|Homo sapiens MMSET type II protein. 29 8.5
AF083388-1|AAD21771.1| 1365|Homo sapiens putative WHSC1 protein ... 29 8.5
AF083387-1|AAD21770.1| 1365|Homo sapiens putative WHSC1 protein ... 29 8.5
AF083386-1|AAD19343.1| 1365|Homo sapiens putative WHSC1 protein ... 29 8.5
AF071593-1|AAC24150.1| 1365|Homo sapiens MMSET type II protein. 29 8.5
AF054589-2|AAF36998.1| 246|Homo sapiens HIC protein isoform p32... 29 8.5
AF054589-1|AAF36999.1| 355|Homo sapiens HIC protein isoform p40... 29 8.5
AB029013-1|BAA83042.2| 715|Homo sapiens KIAA1090 protein protein. 29 8.5
>M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P1 mRNA, complete cds. ).
Length = 114
Score = 67.7 bits (158), Expect = 3e-11
Identities = 35/91 (38%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 151 TGXQISTILKAAAVXVXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXX 324
T +I+ ++KAA V V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83
Query: 325 XXXXXXXXXXXXXXXXXXVESDDDMGFGLFD 417
ESDDDMGFGLFD
Sbjct: 84 TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 67.7 bits (158), Expect = 3e-11
Identities = 35/91 (38%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 151 TGXQISTILKAAAVXVXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXX 324
T +I+ ++KAA V V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83
Query: 325 XXXXXXXXXXXXXXXXXXVESDDDMGFGLFD 417
ESDDDMGFGLFD
Sbjct: 84 TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 67.7 bits (158), Expect = 3e-11
Identities = 35/91 (38%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 151 TGXQISTILKAAAVXVXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXX 324
T +I+ ++KAA V V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83
Query: 325 XXXXXXXXXXXXXXXXXXVESDDDMGFGLFD 417
ESDDDMGFGLFD
Sbjct: 84 TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 67.7 bits (158), Expect = 3e-11
Identities = 35/91 (38%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 151 TGXQISTILKAAAVXVXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXX 324
T +I+ ++KAA V V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83
Query: 325 XXXXXXXXXXXXXXXXXXVESDDDMGFGLFD 417
ESDDDMGFGLFD
Sbjct: 84 TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1
protein.
Length = 114
Score = 67.7 bits (158), Expect = 3e-11
Identities = 35/91 (38%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 151 TGXQISTILKAAAVXVXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXX 324
T +I+ ++KAA V V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83
Query: 325 XXXXXXXXXXXXXXXXXXVESDDDMGFGLFD 417
ESDDDMGFGLFD
Sbjct: 84 TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 65.7 bits (153), Expect = 1e-10
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 151 TGXQISTILKAAAVXVXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXX 324
T +I+ ++KAA V V P+WPGLFAKAL +N+ LI ++G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICDVGAGGPAPAAGAAPAGGPAPS 83
Query: 325 XXXXXXXXXXXXXXXXXXVESDDDMGFGLFD 417
ESDDDMGFGLFD
Sbjct: 84 TAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
>AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal
phosphoprotein P1 protein.
Length = 113
Score = 65.3 bits (152), Expect = 1e-10
Identities = 34/90 (37%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +1
Query: 151 TGXQISTILKAAAVXVXPYWPGLFAKALEGINVRDLITNIGSG--VXXXXXXXXXXXXXX 324
T +I+ ++KAA V V P+WPGLFAKAL +N+ LI N+G+G
Sbjct: 24 TEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPS 83
Query: 325 XXXXXXXXXXXXXXXXXXVESDDDMGFGLF 414
ESDDDMGFGLF
Sbjct: 84 TAAAPAEEKKVEAKKEESEESDDDMGFGLF 113
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 30.7 bits (66), Expect = 3.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 382 ESDDDMGFGLFD 417
ESDDDMGFGLFD
Sbjct: 104 ESDDDMGFGLFD 115
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 30.7 bits (66), Expect = 3.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 382 ESDDDMGFGLFD 417
ESDDDMGFGLFD
Sbjct: 104 ESDDDMGFGLFD 115
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 30.7 bits (66), Expect = 3.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 382 ESDDDMGFGLFD 417
ESDDDMGFGLFD
Sbjct: 104 ESDDDMGFGLFD 115
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 30.7 bits (66), Expect = 3.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 382 ESDDDMGFGLFD 417
ESDDDMGFGLFD
Sbjct: 104 ESDDDMGFGLFD 115
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 30.7 bits (66), Expect = 3.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 382 ESDDDMGFGLFD 417
ESDDDMGFGLFD
Sbjct: 104 ESDDDMGFGLFD 115
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 30.7 bits (66), Expect = 3.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 382 ESDDDMGFGLFD 417
ESDDDMGFGLFD
Sbjct: 104 ESDDDMGFGLFD 115
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 30.7 bits (66), Expect = 3.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 382 ESDDDMGFGLFD 417
ESDDDMGFGLFD
Sbjct: 104 ESDDDMGFGLFD 115
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 30.7 bits (66), Expect = 3.7
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +1
Query: 382 ESDDDMGFGLFD 417
ESDDDMGFGLFD
Sbjct: 104 ESDDDMGFGLFD 115
>AJ295991-1|CAC28351.1| 1388|Homo sapiens Putative Chromatin
modulator protein.
Length = 1388
Score = 30.3 bits (65), Expect = 4.8
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 72 KTQNGVKSXIXMCFLCSHPGGCCCCRNWXANFH 170
++ N + CF+C+ G CC + A+FH
Sbjct: 853 RSSNSSAVNVGFCFVCARGGRLLCCESCPASFH 885
>BC094825-1|AAH94825.2| 584|Homo sapiens Wolf-Hirschhorn syndrome
candidate 1 protein.
Length = 584
Score = 29.5 bits (63), Expect = 8.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 99 IXMCFLCSHPGGCCCCRNWXANFH 170
+ CF+CS G CC + A FH
Sbjct: 50 VSWCFVCSKGGSLLCCESCPAAFH 73
>AY196485-1|AAP33842.1| 246|Homo sapiens I-mfa domain-containing
protein protein.
Length = 246
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +3
Query: 6 CCXHSNVACSLLSLRPPATCTFKTQNGVKSXIXMCFLCSHPGGCCCC 146
CC H +AC C F T + C +C+ CCCC
Sbjct: 166 CCVHCILACLF--------CEFLTLCNIVLGQASCGICTSEACCCCC 204
>AL132868-4|CAM15221.1| 1365|Homo sapiens Wolf-Hirschhorn syndrome
candidate 1 protein.
Length = 1365
Score = 29.5 bits (63), Expect = 8.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 99 IXMCFLCSHPGGCCCCRNWXANFH 170
+ CF+CS G CC + A FH
Sbjct: 831 VSWCFVCSKGGSLLCCESCPAAFH 854
>AL132868-3|CAM15220.1| 713|Homo sapiens Wolf-Hirschhorn syndrome
candidate 1 protein.
Length = 713
Score = 29.5 bits (63), Expect = 8.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 99 IXMCFLCSHPGGCCCCRNWXANFH 170
+ CF+CS G CC + A FH
Sbjct: 179 VSWCFVCSKGGSLLCCESCPAAFH 202
>AJ007042-1|CAB45386.1| 1365|Homo sapiens TRX5 protein protein.
Length = 1365
Score = 29.5 bits (63), Expect = 8.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 99 IXMCFLCSHPGGCCCCRNWXANFH 170
+ CF+CS G CC + A FH
Sbjct: 831 VSWCFVCSKGGSLLCCESCPAAFH 854
>AF330040-1|AAK00344.1| 584|Homo sapiens IL-5 promoter
REII-region-binding protein protein.
Length = 584
Score = 29.5 bits (63), Expect = 8.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 99 IXMCFLCSHPGGCCCCRNWXANFH 170
+ CF+CS G CC + A FH
Sbjct: 50 VSWCFVCSKGGSLLCCESCPAAFH 73
>AF178219-1|AAF23370.1| 1365|Homo sapiens MMSET type II protein.
Length = 1365
Score = 29.5 bits (63), Expect = 8.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 99 IXMCFLCSHPGGCCCCRNWXANFH 170
+ CF+CS G CC + A FH
Sbjct: 831 VSWCFVCSKGGSLLCCESCPAAFH 854
>AF083388-1|AAD21771.1| 1365|Homo sapiens putative WHSC1 protein
protein.
Length = 1365
Score = 29.5 bits (63), Expect = 8.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 99 IXMCFLCSHPGGCCCCRNWXANFH 170
+ CF+CS G CC + A FH
Sbjct: 831 VSWCFVCSKGGSLLCCESCPAAFH 854
>AF083387-1|AAD21770.1| 1365|Homo sapiens putative WHSC1 protein
protein.
Length = 1365
Score = 29.5 bits (63), Expect = 8.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 99 IXMCFLCSHPGGCCCCRNWXANFH 170
+ CF+CS G CC + A FH
Sbjct: 831 VSWCFVCSKGGSLLCCESCPAAFH 854
>AF083386-1|AAD19343.1| 1365|Homo sapiens putative WHSC1 protein
protein.
Length = 1365
Score = 29.5 bits (63), Expect = 8.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 99 IXMCFLCSHPGGCCCCRNWXANFH 170
+ CF+CS G CC + A FH
Sbjct: 831 VSWCFVCSKGGSLLCCESCPAAFH 854
>AF071593-1|AAC24150.1| 1365|Homo sapiens MMSET type II protein.
Length = 1365
Score = 29.5 bits (63), Expect = 8.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 99 IXMCFLCSHPGGCCCCRNWXANFH 170
+ CF+CS G CC + A FH
Sbjct: 831 VSWCFVCSKGGSLLCCESCPAAFH 854
>AF054589-2|AAF36998.1| 246|Homo sapiens HIC protein isoform p32
protein.
Length = 246
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +3
Query: 6 CCXHSNVACSLLSLRPPATCTFKTQNGVKSXIXMCFLCSHPGGCCCC 146
CC H +AC C F T + C +C+ CCCC
Sbjct: 166 CCVHCILACLF--------CEFLTLCNIVLGQASCGICTSEACCCCC 204
>AF054589-1|AAF36999.1| 355|Homo sapiens HIC protein isoform p40
protein.
Length = 355
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +3
Query: 6 CCXHSNVACSLLSLRPPATCTFKTQNGVKSXIXMCFLCSHPGGCCCC 146
CC H +AC C F T + C +C+ CCCC
Sbjct: 275 CCVHCILACLF--------CEFLTLCNIVLGQASCGICTSEACCCCC 313
>AB029013-1|BAA83042.2| 715|Homo sapiens KIAA1090 protein protein.
Length = 715
Score = 29.5 bits (63), Expect = 8.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 99 IXMCFLCSHPGGCCCCRNWXANFH 170
+ CF+CS G CC + A FH
Sbjct: 181 VSWCFVCSKGGSLLCCESCPAAFH 204
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,447,834
Number of Sequences: 237096
Number of extensions: 801235
Number of successful extensions: 1424
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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