Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_L12
(560 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 91 1e-18
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 91 1e-18
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 91 1e-18
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 88 7e-18
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 29 4.3
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 29 4.3
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 29 4.3
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 29 4.3
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 28 9.9
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 28 9.9
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 28 9.9
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 28 9.9
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 90.6 bits (215), Expect = 1e-18
Identities = 48/89 (53%), Positives = 52/89 (58%)
Frame = +1
Query: 151 TGXQISTILKAAAVXVXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXX 330
TG +I+TILKAA V V PYWPGLFAKALEGINV+DLITNIGSGV
Sbjct: 24 TGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAA 83
Query: 331 XXXXXXXXXXXXXXXXVESDDDMGFGLFD 417
+SDDDMGFGLFD
Sbjct: 84 PAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 90.6 bits (215), Expect = 1e-18
Identities = 48/89 (53%), Positives = 52/89 (58%)
Frame = +1
Query: 151 TGXQISTILKAAAVXVXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXX 330
TG +I+TILKAA V V PYWPGLFAKALEGINV+DLITNIGSGV
Sbjct: 24 TGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAA 83
Query: 331 XXXXXXXXXXXXXXXXVESDDDMGFGLFD 417
+SDDDMGFGLFD
Sbjct: 84 PAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 90.6 bits (215), Expect = 1e-18
Identities = 48/89 (53%), Positives = 52/89 (58%)
Frame = +1
Query: 151 TGXQISTILKAAAVXVXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXX 330
TG +I+TILKAA V V PYWPGLFAKALEGINV+DLITNIGSGV
Sbjct: 24 TGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAA 83
Query: 331 XXXXXXXXXXXXXXXXVESDDDMGFGLFD 417
+SDDDMGFGLFD
Sbjct: 84 PAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 88.2 bits (209), Expect = 7e-18
Identities = 47/89 (52%), Positives = 51/89 (57%)
Frame = +1
Query: 151 TGXQISTILKAAAVXVXPYWPGLFAKALEGINVRDLITNIGSGVXXXXXXXXXXXXXXXX 330
TG +I+TILKAA V V PYWPGLFAKALE INV+DLITNIGSGV
Sbjct: 24 TGEKINTILKAANVEVEPYWPGLFAKALEAINVKDLITNIGSGVGAAPAGGAAPAAAAAA 83
Query: 331 XXXXXXXXXXXXXXXXVESDDDMGFGLFD 417
+SDDDMGFGLFD
Sbjct: 84 PAAESKKEEKKKEEESDQSDDDMGFGLFD 112
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1
Query: 382 ESDDDMGFGLFD 417
E DDDMGFGLFD
Sbjct: 306 EEDDDMGFGLFD 317
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1
Query: 382 ESDDDMGFGLFD 417
E DDDMGFGLFD
Sbjct: 306 EEDDDMGFGLFD 317
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1
Query: 382 ESDDDMGFGLFD 417
E DDDMGFGLFD
Sbjct: 306 EEDDDMGFGLFD 317
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1
Query: 382 ESDDDMGFGLFD 417
E DDDMGFGLFD
Sbjct: 306 EEDDDMGFGLFD 317
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -1
Query: 263 VIRSRTLMPSKALANRPGQYGXTXTAAAFKMVEI 162
+I S+ L+P+K N P QY T A K +I
Sbjct: 255 LIASQNLVPAKTHINSPTQYNDTNATNALKTAKI 288
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/47 (29%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +3
Query: 6 CCXHSNVACSLLSLRPPAT-CTFKTQNGVKSXIXMCFLCSHPGGCCC 143
CC + C P T C + N C C P GCCC
Sbjct: 719 CCMPCSNQCPWSWYYNPCTGCYYYCANCCNGCRNCCNYCCSPCGCCC 765
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/47 (29%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +3
Query: 6 CCXHSNVACSLLSLRPPAT-CTFKTQNGVKSXIXMCFLCSHPGGCCC 143
CC + C P T C + N C C P GCCC
Sbjct: 118 CCMPCSNQCPWSWYYNPCTGCYYYCANCCNGCRNCCNYCCSPCGCCC 164
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/47 (29%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +3
Query: 6 CCXHSNVACSLLSLRPPAT-CTFKTQNGVKSXIXMCFLCSHPGGCCC 143
CC + C P T C + N C C P GCCC
Sbjct: 719 CCMPCSNQCPWSWYYNPCTGCYYYCANCCNGCRNCCNYCCSPCGCCC 765
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,216,272
Number of Sequences: 53049
Number of extensions: 251023
Number of successful extensions: 519
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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