Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_L11
         (765 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q583Y0 Cluster: Putative uncharacterized protein; n=1; ...    36   1.5  
UniRef50_Q01MA5 Cluster: OSIGBa0115D20.3 protein; n=9; Oryza sat...    35   2.5  

>UniRef50_Q583Y0 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 471

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = +1

Query: 184 LLVLYFLVHFPAQAGSCAFVYCVNDLRSQPLSSETICS*LIPMMFERFPTSSSAA 348
           LL ++ ++H P ++ + AF +C +D    PL   T C  ++P   ER PT +  A
Sbjct: 205 LLQVFLILHMPERSPAVAFRFCSHD----PLPGGTTCLSVLPRCAERLPTLAHPA 255


>UniRef50_Q01MA5 Cluster: OSIGBa0115D20.3 protein; n=9; Oryza
           sativa|Rep: OSIGBa0115D20.3 protein - Oryza sativa
           (Rice)
          Length = 653

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = -3

Query: 280 CSTAGYANRSHSTQKHNYQPGQENVQESTILKEILLHTV 164
           C T+ + N  H   KHN + GQ+  +   +LKE+L HTV
Sbjct: 115 CGTSVFWN--HLNNKHNIKSGQQQKRVKMVLKELLRHTV 151


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,533,274
Number of Sequences: 1657284
Number of extensions: 12300988
Number of successful extensions: 26746
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26733
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)