Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_L11
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   2.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.7  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   4.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   4.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.2  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.2  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 269 WLRKSFTQYTKAQLPAWAGKCT 204
           W +    +Y K  LPA AGK +
Sbjct: 164 WFQNRRVKYKKEDLPAAAGKAS 185


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 525 YSAHKLFLNYVLVMLVNFFYIKILK*FYSGFL 620
           ++ H LFL  +   +V  F++  +  FY  F+
Sbjct: 123 FTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFI 154


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/14 (64%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
 Frame = -3

Query: 523 CTSYVVILHF-TFN 485
           C  YVV+LHF T+N
Sbjct: 175 CVLYVVLLHFLTYN 188


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/14 (64%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
 Frame = -3

Query: 523 CTSYVVILHF-TFN 485
           C  YVV+LHF T+N
Sbjct: 175 CVLYVVLLHFLTYN 188


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 328 PTSSSAASFPREPLCL*DSLDGRSHSRNKLEVMP*PFKCHRTNLLSE 468
           PT SS  S   +PL   D  + R +SR   + +  P      ++LSE
Sbjct: 61  PTPSSPRSISEDPLNCRDLPNSRCNSRESSDSLVQPRCPSGESMLSE 107


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
 Frame = -3

Query: 280 CSTAGYANRSHSTQKHNYQ---PGQENVQESTILKEI 179
           CS   Y +R    QKH Y      +E V  S+ ++ +
Sbjct: 464 CSLKDYVSRIKPNQKHIYYITGESKEQVANSSFVERV 500


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 534 HKLFLNYVLVMLVNFFYI 587
           H+L  NY ++    FFY+
Sbjct: 161 HRLLANYKVITSDEFFYL 178


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,213
Number of Sequences: 336
Number of extensions: 3489
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)