Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_L10
         (491 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   2.0  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   3.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   3.5  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 327 YINLCVKLTKPSKMT 371
           Y  +CVKL  P K+T
Sbjct: 330 YPEVCVKLANPQKLT 344


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 220 RTGPFTFLMI 191
           RTG FTFLM+
Sbjct: 76  RTGSFTFLMV 85


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -2

Query: 220 RTGPFTFLMI 191
           RTG FTFLM+
Sbjct: 76  RTGSFTFLMV 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,009
Number of Sequences: 336
Number of extensions: 1619
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)