Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_L07
(643 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 41 7e-04
01_01_0229 - 1943473-1943922 41 7e-04
01_01_0231 + 1951047-1951499 40 0.001
02_05_0972 + 33198035-33198277,33198366-33198641 40 0.002
11_02_0041 - 7669692-7670312 39 0.004
01_01_0227 + 1933247-1933699 36 0.021
02_02_0077 - 6586638-6587165 36 0.027
02_01_0222 + 1450233-1450766 35 0.048
01_01_0228 + 1940149-1940649 33 0.19
01_01_0599 - 4448290-4448790 33 0.25
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 32 0.45
01_01_0575 - 4271910-4272371,4272923-4272928,4272999-4273174,427... 31 1.0
04_04_1584 + 34601927-34602144,34603324-34603510,34604239-346044... 29 2.4
02_05_0494 + 29486960-29487454 29 2.4
02_01_0188 - 1262908-1262970,1264185-1264790,1265290-1266030 29 4.1
01_01_0794 - 6184622-6185317 28 5.5
11_01_0656 - 5301048-5301441,5301779-5301976,5302056-5302228,530... 28 7.2
08_02_0597 + 19132492-19133230,19133827-19134371,19134563-19135264 28 7.2
01_05_0517 - 22893592-22894079,22894921-22894954 28 7.2
12_02_0156 - 14532000-14532098,14532669-14534330,14534445-145346... 27 9.6
05_05_0109 - 22454539-22456268,22457069-22457279 27 9.6
04_01_0106 + 1102880-1105691,1105781-1105806 27 9.6
03_01_0540 - 4055635-4055743,4055829-4055981,4056037-4056104,405... 27 9.6
03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,352... 27 9.6
02_05_0787 - 31742685-31742702,31742703-31742744,31742993-317430... 27 9.6
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 41.1 bits (92), Expect = 7e-04
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Frame = +2
Query: 320 DVQHFSPDEISVKTAEGYVVV-----EAKHEEKQDEHGYVSR---QFVRKYSLPEGADTA 475
D+ +E+ V+ EG V+V + E+K D+ V R QF+R++ LPE A
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 476 NVVSELSTDGILTVTAPRKVIDDKGERVVPIT 571
V + L +G+LTVT P+ + + + I+
Sbjct: 119 QVKAGLE-NGVLTVTVPKAEVKKPEVKAIEIS 149
>01_01_0229 - 1943473-1943922
Length = 149
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Frame = +2
Query: 320 DVQHFSPDEISVKTAEGYVVV-----EAKHEEKQDEHGYVSR---QFVRKYSLPEGADTA 475
D+ +E+ V+ EG V+V + E+K D+ V R QF+R++ LPE A
Sbjct: 58 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117
Query: 476 NVVSELSTDGILTVTAPRKVIDDKGERVVPIT 571
V + + +G+LTVT P+ + + + I+
Sbjct: 118 QVKASME-NGVLTVTVPKAEVKKPEVKAIEIS 148
>01_01_0231 + 1951047-1951499
Length = 150
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 8/92 (8%)
Frame = +2
Query: 320 DVQHFSPDEISVKTAEGYVVV-----EAKHEEKQDEHGYVSR---QFVRKYSLPEGADTA 475
D+ +E+ V+ EG V+V + E+K D+ V R QF+R++ LPE A
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 476 NVVSELSTDGILTVTAPRKVIDDKGERVVPIT 571
V + + +G+LTVT P+ + + + I+
Sbjct: 119 QVKAGME-NGVLTVTVPKAEVKKPEVKAIEIS 149
>02_05_0972 + 33198035-33198277,33198366-33198641
Length = 172
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Frame = +2
Query: 353 VKTAEGYVVVEAKHEEKQDEHGYVS-------RQFVRKYSLPEGADTANVVSELSTDGIL 511
+K++ G + K EE++ E Y+ R F RK+ LPE ADT +S +G+L
Sbjct: 92 MKSSNGAGNGKRKREEEEGECKYIRLERRASPRAFARKFRLPEDADTGG-ISARCENGVL 150
Query: 512 TVTAPRKVIDDKGERVVPIT 571
TVT ++ +K + V +T
Sbjct: 151 TVTVKKRPPPEKKTKSVQVT 170
>11_02_0041 - 7669692-7670312
Length = 206
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +2
Query: 431 QFVRKYSLPEGADTANVVSELSTDGILTVTAPRKVIDDKGE--RVVPITKTGPVRKESAX 604
+F R++ +P GAD V + L DG+LTVT P KV +G RVV I G E+
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVP-KVPGHRGREPRVVAIDGAGAGDMEAEV 198
Query: 605 SKNAK 619
K +K
Sbjct: 199 VKASK 203
>01_01_0227 + 1933247-1933699
Length = 150
Score = 36.3 bits (80), Expect = 0.021
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +2
Query: 380 VEAKHEEKQDEHGYVSRQFVRKYSLPEGADTANVVSELSTDGILTVTAPRKVIDDKGERV 559
V+ K++E+ S +F R++ LP GA V + + +G+LTVT P++ +
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMD-NGVLTVTVPKEETKKPQLKA 145
Query: 560 VPIT 571
+PI+
Sbjct: 146 IPIS 149
>02_02_0077 - 6586638-6587165
Length = 175
Score = 35.9 bits (79), Expect = 0.027
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 431 QFVRKYSLPEGADTANVVSELSTDGILTVTAPRK-VIDDKGERVVPITKTG 580
+F+R++ LPE AD V +E DG+LTVT +K + K RVV + G
Sbjct: 117 KFMRRFPLPESADLDGVRAEYK-DGVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>02_01_0222 + 1450233-1450766
Length = 177
Score = 35.1 bits (77), Expect = 0.048
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 425 SRQFVRKYSLPEGADTANVVSELSTDGILTVTAPRKVIDDKGERVVPIT 571
S +FVR LP A+T V + L +G+LT+T P+ R++PIT
Sbjct: 129 SERFVRTVRLPPNANTDGVHAALD-NGVLTITIPKDNDRKPHARIIPIT 176
>01_01_0228 + 1940149-1940649
Length = 166
Score = 33.1 bits (72), Expect = 0.19
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Frame = +2
Query: 341 DEISVKTAEGYVVV-----EAKHEEKQDEHGYVSRQ---FVRKYSLPEGADTANVVSELS 496
+E+ V+ EG V+V + EEK ++ R F ++ LP+ A ++V
Sbjct: 65 EEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDA-VVDLVRASM 123
Query: 497 TDGILTVTAPRKVIDDK 547
G+LTVT P KV+ DK
Sbjct: 124 DGGMLTVTVP-KVVTDK 139
>01_01_0599 - 4448290-4448790
Length = 166
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = +2
Query: 395 EEKQDEHGYVSRQ-----FVRKYSLPEGADTANVVSELSTDGILTVTAPR 529
EEK++ Y+ + F+RK+ LP+ AD + +S + DG+LTVT +
Sbjct: 101 EEKEESCKYLRMERRMGKFMRKFVLPDNAD-VDKISAVCQDGVLTVTVEK 149
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 31.9 bits (69), Expect = 0.45
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +2
Query: 236 RPWRHTASLARDLGSTIKTEKDKFQINLDVQHFSPDEISVKTAE 367
RPW H + L + I TEK Q N D + S I VK AE
Sbjct: 432 RPWEHKVVNEKPLQNNIDTEK-PLQNNTDTEKSSSSAIDVKLAE 474
>01_01_0575 -
4271910-4272371,4272923-4272928,4272999-4273174,
4274150-4275299
Length = 597
Score = 30.7 bits (66), Expect = 1.0
Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 9/135 (6%)
Frame = +2
Query: 257 SLARDLGSTIKTEKDKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQF 436
+L K +KF I +++ ++PD V+ E +V A EK++EH V +
Sbjct: 200 TLVERAAGVAKNWSEKFGIKMEL--YAPDNNEVEMTEAPLVENATATEKKEEH--VDEEE 255
Query: 437 VRKYSLPEGADTANVVSELSTDGILTVTAPRKVIDDKGE---RVVPITKTGPVRK----- 592
+ PE A+ + + P +V + GE +V KTG V K
Sbjct: 256 EEEEEDPEEMVPASEEEADAEEVEKEEEDPEEVEKEGGEAEAKVANAAKTGEVEKRKVEE 315
Query: 593 -ESAXSKNAKEADQG 634
+ A + KE ++G
Sbjct: 316 DKKASGREVKEGEKG 330
>04_04_1584 +
34601927-34602144,34603324-34603510,34604239-34604496,
34604866-34604965,34608523-34608639,34608704-34608804,
34609035-34610141
Length = 695
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -3
Query: 281 WSLGRGPKTPCAAKVGSSRELSTASSCLLRSRPELAASRSPDPQVCCLAAFY 126
W GR P + ++ LS++SS + R + AA+ P+P VC + A Y
Sbjct: 147 WVSGRRETPPQPRRETAAVLLSSSSSPIHLPRRDDAAAAIPNPHVCSVRACY 198
>02_05_0494 + 29486960-29487454
Length = 164
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 428 RQFVRKYSLPEGADTANVVSELSTDGILTVTAPRK 532
R V ++ LPE A A+ S DG+LTVT P++
Sbjct: 106 RAAVTQFRLPEDA-AADEASARMADGVLTVTVPKR 139
>02_01_0188 - 1262908-1262970,1264185-1264790,1265290-1266030
Length = 469
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -3
Query: 263 PKTPCAAKVGSSRELSTASSCLLRSRPELAASRSPDPQVCCLAAFYRDILHLPL 102
P P AA VG + ++ SCL + L + + DP+V + F++ + +PL
Sbjct: 371 PPPPGAAVVGYQNRIQSSGSCLSGADDGLLTACTWDPRVRHNSFFFQSGISVPL 424
>01_01_0794 - 6184622-6185317
Length = 231
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3
Query: 221 LSTASSCLLRSRPELAASRSPDPQVCCLAAFYRDILHLPL 102
L SC SR S S +P+ CC Y ++L + L
Sbjct: 27 LPVDQSCFALSRLSYRRSSSSNPRACCSTTSYLEVLAISL 66
>11_01_0656 -
5301048-5301441,5301779-5301976,5302056-5302228,
5302691-5302935,5303014-5303191,5303578-5303760,
5303858-5303962,5304621-5304758,5304846-5305802
Length = 856
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 154 GSGLRDAANSGRLLNKHDDAVDSSRLLPTLAAHGVFGPRPR-LHNQDGKR*IPDQFG 321
G G D+ NS + DD D SR L +A GP+ R Q+G+R FG
Sbjct: 99 GGGSSDSVNSVLQNEEFDDDDDDSRSLSHDSAQSSPGPQDRSRRTQEGRRGATVTFG 155
>08_02_0597 + 19132492-19133230,19133827-19134371,19134563-19135264
Length = 661
Score = 27.9 bits (59), Expect = 7.2
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 564 GTTLSPLSSITFLGAVTVKIPSVDSSETTLAVSAPSGKEYL 442
G SPL LG + + +D S TTL+ S P G+ L
Sbjct: 198 GIGASPLYLAVSLGRLEIARDLLDRSPTTLSYSGPEGQNVL 238
>01_05_0517 - 22893592-22894079,22894921-22894954
Length = 173
Score = 27.9 bits (59), Expect = 7.2
Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 3/110 (2%)
Frame = +2
Query: 305 FQINLDVQHFSPDEISVKT--AEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGADTAN 478
+ + LD+ FS DE+ V+ A G V V + H + R LP AD+
Sbjct: 32 YVVRLDIAGFSKDEVDVRVNGATGRVTVLGQRPAAAGPHVRLRRVI----QLPPTADSDR 87
Query: 479 VVSE-LSTDGILTVTAPRKVIDDKGERVVPITKTGPVRKESAXSKNAKEA 625
V + + T LTV R VV T E+ K + A
Sbjct: 88 VAARFVGTTLFLTVPKKRPAAAAAATGVVMATTMEVAETETETEKKKERA 137
>12_02_0156 -
14532000-14532098,14532669-14534330,14534445-14534660,
14534730-14534907,14535065-14535276
Length = 788
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/64 (28%), Positives = 22/64 (34%)
Frame = -2
Query: 426 DTYPCSSCFSSCLASTTT*PSAVFTDISSGEKCWTSKLIWNLSFSVLIVEPRSRAKDAVC 247
D C + C A +F + W S L+W FS V R VC
Sbjct: 259 DLITCGASSGVCAAFRAPVGGVLFA-LEEVATWWRSALLWRTFFSTATVVVVLRGFIEVC 317
Query: 246 RQGR 235
R GR
Sbjct: 318 RNGR 321
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 455 PEGADTANVVSELSTDGILTVTAPRKVIDDKGERVVPITKTGPVRKESAXSKNAKEADQ 631
P G NV ++ +GIL V+A K K + + K G + KE K +EA++
Sbjct: 473 PRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDK-GRLSKEE-IEKMVQEAEK 529
>04_01_0106 + 1102880-1105691,1105781-1105806
Length = 945
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 242 WRHTASLARDLGSTIKTEKD-KFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEK 403
W+ A+ ++ + ++ ++ K Q N+D+ SP I + ++ + + KH K
Sbjct: 119 WQRLAAELKEAQNRLQNLRNLKVQYNIDLSEESPSSIRYEDSQVHTIQHIKHNNK 173
>03_01_0540 -
4055635-4055743,4055829-4055981,4056037-4056104,
4056486-4056580,4057180-4057241,4057371-4057410,
4058124-4059141,4059231-4059611,4059873-4059880,
4061005-4061067,4061416-4061719
Length = 766
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -2
Query: 507 IPSVDSSETTLAVSAPSGKEYLRTNCLDTYPCSSCFSSCLASTT 376
I SVD + TL AP E C D PC+ FS L T+
Sbjct: 550 IISVDMKQNTLQAVAPISAERFSVLCSDCRPCA--FSKYLKITS 591
>03_01_0458 -
3521938-3522024,3522133-3522213,3522673-3522806,
3523189-3523270,3523420-3523692,3523953-3524162,
3524252-3524337,3525197-3525289,3526003-3526227,
3526320-3526930,3529328-3529395,3529491-3529679,
3529773-3529901,3530013-3532484
Length = 1579
Score = 27.5 bits (58), Expect = 9.6
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Frame = +2
Query: 233 FRPWRHTASLA---RDLGSTIKTEKDKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEK 403
+RP TA+L +L + +++DK ++ D+ +S + S T++ + H E+
Sbjct: 434 WRPVDATAALKILEEELADNVGSDRDKDSMSSDI--WSTKDKS-DTSDSST---SPHNEE 487
Query: 404 QDEHGYVSRQFVRKYSLPEGADTANVVSEL 493
+ G V+R+ RK+ L + + AN++ +
Sbjct: 488 CESFGAVTREGDRKWPLSDDEERANILERI 517
>02_05_0787 -
31742685-31742702,31742703-31742744,31742993-31743022,
31743337-31744183,31744431-31744560,31744682-31744814
Length = 399
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/44 (22%), Positives = 22/44 (50%)
Frame = +2
Query: 173 PLTPDDFLTNMMTPWIVHDYFRPWRHTASLARDLGSTIKTEKDK 304
PL PD +M +I + + W++T S D+ ++ +++
Sbjct: 356 PLLPDALFDELMRDYISNCFLEDWKNTDSKNLDVSDILQVSRNR 399
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,822,609
Number of Sequences: 37544
Number of extensions: 353845
Number of successful extensions: 1058
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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