Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_L07
(643 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 72 5e-13
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 67 1e-11
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 58 6e-09
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 55 4e-08
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 55 4e-08
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 4e-08
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 55 4e-08
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 55 4e-08
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 41 0.001
SB_18447| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_3515| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5) 29 2.4
SB_59029| Best HMM Match : Pkinase (HMM E-Value=0) 29 3.2
SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05) 29 3.2
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 29 4.2
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_9740| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_17340| Best HMM Match : 7tm_3 (HMM E-Value=0) 28 7.4
SB_48165| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7) 27 9.8
SB_23485| Best HMM Match : PsbJ (HMM E-Value=2.4) 27 9.8
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 71.7 bits (168), Expect = 5e-13
Identities = 33/85 (38%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +2
Query: 272 LGSTIKTEKDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKY 448
L + + E DK +I LDV+++ P+EIS+K G + ++ KH+ + EHGY + +F R Y
Sbjct: 29 LAANTEMEGDKVEIATLDVKNYRPEEISLKVEHGRIKIDGKHKS-EGEHGYETSEFHRSY 87
Query: 449 SLPEGADTANVVSELSTDGILTVTA 523
+LP+G D + V S ++ DG+L + A
Sbjct: 88 NLPDGVDVSTVSSRITGDGLLHIEA 112
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 67.3 bits (157), Expect = 1e-11
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +2
Query: 293 EKDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGAD 469
+ DKFQI LDV+ F P+EI+ K G + V + +E G+ S++F R Y+LPEG D
Sbjct: 2 DADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEE-GFDSKEFRRCYNLPEGVD 60
Query: 470 TANVVSELSTDGILTVTAPRKVIDDKGERVVPITK 574
+++ + ++ DG+L V A +K E P TK
Sbjct: 61 ESSISTRIAEDGMLHVEALKKSPPATTENKAPATK 95
Score = 53.2 bits (122), Expect = 2e-07
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +2
Query: 302 KFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGY-VSRQFVRKYSLPEGADTAN 478
KF + LDV F P+E+ VK + V A+ E +EHG+ +RQF R + LP D
Sbjct: 99 KFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVLPREVDMDT 156
Query: 479 VVSELSTDGILTVTAPRK 532
+V L DG+L + A ++
Sbjct: 157 LVPRLGKDGVLYIEADKR 174
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 58.0 bits (134), Expect = 6e-09
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +2
Query: 293 EKDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGAD 469
+K+ +I LDV+ + P+EIS K G V V+ +H + E G+ ++F R ++LPEG D
Sbjct: 3 KKNTLEIAKLDVKEYRPEEISFKVENGVVKVQGRH-VNEGEFGFELKEFRRTFTLPEGID 61
Query: 470 TANVVSELSTDGILTVTAPRKVI 538
NV S +S G L + A RK +
Sbjct: 62 PENVTSRISNHGHLHIEA-RKAL 83
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/83 (31%), Positives = 44/83 (53%)
Frame = +2
Query: 287 KTEKDKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGA 466
K ++DKF + +DV F P+ I V+ ++V A HE + + H Y + F R++ LP
Sbjct: 92 KAKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGH-YHAMHFNRQFVLPREV 150
Query: 467 DTANVVSELSTDGILTVTAPRKV 535
D ++ + L +G L A + V
Sbjct: 151 DMDSLTTRLDKEGKLHFEAKKSV 173
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +2
Query: 296 KDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGADT 472
++K +I LDV+ + P+EIS K G V V+ +H + G+ ++F R ++LPEG +
Sbjct: 5 ENKLEIAKLDVREYRPEEISFKVENGVVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 63
Query: 473 ANVVSELSTDGILTVTAPRKVIDDKGER 556
+NV + +S G L + A + + + G +
Sbjct: 64 SNVKTRISNHGQLHIEAMKALPEPDGAK 91
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/86 (29%), Positives = 47/86 (54%)
Frame = +2
Query: 275 GSTIKTEKDKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSL 454
G+ +++ DKF + +DV+ F P+ I V+ ++V A HE + + H Y + F R++ L
Sbjct: 89 GAKKESKDDKFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFIL 147
Query: 455 PEGADTANVVSELSTDGILTVTAPRK 532
P D ++ + L +G L A ++
Sbjct: 148 PREVDMDSLTTRLDKEGKLHFEAKKR 173
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +2
Query: 296 KDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGADT 472
++K +I LDV+ + P+EIS K G+V V+ +H + G+ ++F R ++LPEG +
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 62
Query: 473 ANVVSELSTDGILTVTA 523
+NV + +S G L + A
Sbjct: 63 SNVKTRISNHGQLHIEA 79
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = +2
Query: 299 DKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGADTA 475
D+ +I LDV+ + P+EIS K G+V V+ +H + G+ ++F R ++LPEG + +
Sbjct: 239 DELEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEAS 297
Query: 476 NVVSELSTDGILTVTA 523
NV + +S G L + A
Sbjct: 298 NVKTRISNHGQLHIEA 313
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/78 (32%), Positives = 41/78 (52%)
Frame = +2
Query: 299 DKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGADTAN 478
DKF + +DV F PD I V+ ++V A HE + + H Y + F R++ LP D +
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 479 VVSELSTDGILTVTAPRK 532
+ + L +G L A ++
Sbjct: 156 LTTRLDKEGKLHFEAKKR 173
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/78 (32%), Positives = 41/78 (52%)
Frame = +2
Query: 299 DKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGADTAN 478
DKF + +DV F PD I V+ ++V A HE + + H Y + F R++ LP D +
Sbjct: 331 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 389
Query: 479 VVSELSTDGILTVTAPRK 532
+ + L +G L A ++
Sbjct: 390 LTTRLDKEGKLHFEAKKR 407
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +2
Query: 296 KDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGADT 472
++K +I LDV+ + P+EIS K G+V V+ +H + G+ ++F R ++LPEG +
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFTLPEGVEA 62
Query: 473 ANVVSELSTDGILTVTA 523
+NV + +S G L + A
Sbjct: 63 SNVKTRISNHGQLHIEA 79
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/78 (32%), Positives = 41/78 (52%)
Frame = +2
Query: 299 DKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGADTAN 478
DKF + +DV F PD I V+ ++V A HE + + H Y + F R++ LP D +
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 479 VVSELSTDGILTVTAPRK 532
+ + L +G L A ++
Sbjct: 156 LTTRLDKEGKLHFEAKKR 173
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +2
Query: 296 KDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGADT 472
++K +I LDV+ + P+EIS K G+V V+ +H + G+ ++F R ++LPEG +
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGVEA 62
Query: 473 ANVVSELSTDGILTVTA 523
+NV + +S G L + A
Sbjct: 63 SNVKTRISNHGQLHIEA 79
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/78 (32%), Positives = 41/78 (52%)
Frame = +2
Query: 299 DKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGADTAN 478
DKF + +DV F PD I V+ ++V A HE + + H Y + F R++ LP D +
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 479 VVSELSTDGILTVTAPRK 532
+ + L +G L A ++
Sbjct: 156 LTTRLDKEGKLHFEAKKR 173
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/77 (35%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +2
Query: 296 KDKFQI-NLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGADT 472
++K +I LDV+ + P+EIS K G+V V+ +H + G+ ++F R ++LPEG +
Sbjct: 4 ENKLEIAKLDVREYRPEEISFKVENGFVKVQGRH-VNEGPFGFELKEFRRTFALPEGVEA 62
Query: 473 ANVVSELSTDGILTVTA 523
+NV + +S G L + A
Sbjct: 63 SNVKTRISNHGQLHIEA 79
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/78 (32%), Positives = 41/78 (52%)
Frame = +2
Query: 299 DKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGADTAN 478
DKF + +DV F PD I V+ ++V A HE + + H Y + F R++ LP D +
Sbjct: 97 DKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGH-YHAMHFNRQFVLPREVDMDS 155
Query: 479 VVSELSTDGILTVTAPRK 532
+ + L +G L A ++
Sbjct: 156 LTTRLDKEGKLHFEAKKR 173
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 278 STIKTEKDKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHG-YVSRQFVRKYSL 454
S + KF + LDV F P+E+ VK + V A+ E +EHG + +RQF R + L
Sbjct: 19 SAATKDDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQE--CEEHGFFTARQFNRHFVL 76
Query: 455 PE 460
P+
Sbjct: 77 PQ 78
>SB_18447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 32.3 bits (70), Expect = 0.34
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 284 IKTEKDKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEH 415
I + D+F I D H DE+ ++T E Y+ + H ++ + H
Sbjct: 45 IHLDTDEFHIETDELHIDIDELHIETYELYIDTDELHTDRNEIH 88
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +2
Query: 293 EKDKFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEH 415
+ D+ I+ D QH DEI + T E ++ + H + + H
Sbjct: 27 DTDELYIDKDEQHIDTDEIHLDTDEFHIETDELHIDIDELH 67
>SB_25956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1146
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 314 NLDVQHFSPDEI--SVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGADTANVV 484
++DV S ++I ++ A+G + E+ H DE+G + F++ S E A A V
Sbjct: 94 DVDVSSISGEDILRAIDAADGDISGESGHVTDSDENGDIDSSFIKLESSSESAPLATKV 152
>SB_3515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1295
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 257 TPCAAKVGSSRELSTASSCLLRSRPELAASRSPD 156
TP +A SS L S+CL+ S+P L +S D
Sbjct: 835 TPSSATSTSSLSLKATSTCLVESKPPLTKQKSLD 868
>SB_24406| Best HMM Match : DUF536 (HMM E-Value=1.5)
Length = 436
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 383 EAKHEEKQDEHGYVSRQFVRKYSLPEGAD 469
+ KHEE++D HGY+ + +++L + D
Sbjct: 70 QVKHEEREDRHGYLKDKVTLQHALIQQQD 98
>SB_59029| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 1023
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +2
Query: 302 KFQINLDVQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEG 463
K +IN D + ++ + + + Y+ AK E + ++G ++ +KY PEG
Sbjct: 730 KLRINADEKEEQEQKVPISSDKRYINGHAKDENETVKNGNMNLDNSQKYFSPEG 783
>SB_13913| Best HMM Match : WH2 (HMM E-Value=8.8e-05)
Length = 493
Score = 29.1 bits (62), Expect = 3.2
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Frame = +2
Query: 128 KKQRDNKLVDQDFGMPLTPDDFLTNMMTPWIVHDYFRPWRHTASLARDLGSTIKTEKDKF 307
KK+R++K FG L+P+ F + V P R ++ D S + +K K
Sbjct: 140 KKRRESKSKRVSFGPMLSPEQFDKELPPATPVRRGATPRR----VSSDRKSLLMDQKKKH 195
Query: 308 QINLD-VQHFSPDEISVKTAEGYVVVEAKHEEKQDEHGYVSRQFVRK---YSLPEGADTA 475
+N + ++ +E + KT E V E K EE ++E + + V + LPE T
Sbjct: 196 IVNENRIEELPEEEATPKTPE--EVEENKIEEPEEEAISKTPEEVTENKIKELPEEEATP 253
Query: 476 NVVSELSTDGILTVTAPR 529
V E ++AP+
Sbjct: 254 KEVKETPRRSSRRLSAPQ 271
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 383 EAKHEEKQDEHGYVSRQFVRKYSLPEGADTANVVSELSTDGILT 514
E K+EE DEHG + R+ + + V ++ DG+ T
Sbjct: 1187 ETKYEEYVDEHGQIIRRTTKVKHTAVKQERTTVTKTVTRDGVTT 1230
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = -3
Query: 263 PKTPCA--AKVGSSRELSTA-SSCLLRSRPELAASRSPDPQVCCLAAF 129
PK C+ KVGS+ S SSCLL +P P CCLAAF
Sbjct: 1886 PKKCCSKPTKVGSAPTSSQCPSSCLLACQPSC-------PMECCLAAF 1926
>SB_9740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 417 DTCLGSLCASTPYQKGLTQ 473
+TC G +CA + YQK TQ
Sbjct: 60 NTCAGLICAMSDYQKAFTQ 78
>SB_17340| Best HMM Match : 7tm_3 (HMM E-Value=0)
Length = 890
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 561 TTLSPLSSITFLGAVTVKIPSVDSSETTLAVSAPSGKEYLRT 436
T+ + L FL AV +IP VD+S T+ +S+P K + RT
Sbjct: 213 TSRAALPLANFLQAV--RIPLVDASATSEELSSPLYKTFFRT 252
>SB_48165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 483
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 359 TAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGADTANVVSELST 499
TAE + K+ K D H YV + + + L E ++ AN++ + T
Sbjct: 325 TAEHVTKIAKKNNWKYDTHRYVIKYDITEVLLDEESEKANMLLDFYT 371
>SB_36775| Best HMM Match : BLYB (HMM E-Value=3.7)
Length = 300
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +2
Query: 359 TAEGYVVVEAKHEEKQDEHGYVSRQFVRKYSLPEGADTANVVSELST 499
TAE + K+ K D H YV + + + L E ++ AN++ + T
Sbjct: 205 TAEHVTKIAKKNNWKYDTHRYVIKYDITEVLLDEESEKANMLLDFYT 251
>SB_23485| Best HMM Match : PsbJ (HMM E-Value=2.4)
Length = 497
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = +2
Query: 206 MTPWIVHDYFRPW-----RHTASLARDLGSTIKTEK 298
+TP+ V+D+ RPW R R LG+ IK EK
Sbjct: 404 VTPYQVNDWTRPWIGKEQRLFVEKLRSLGANIKCEK 439
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,595,451
Number of Sequences: 59808
Number of extensions: 414932
Number of successful extensions: 1201
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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