Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_L06
         (784 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    29   0.042
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    27   0.13 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.4  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 29.1 bits (62), Expect = 0.042
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 142 EKGDRGYPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPAS 273
           +K  +G P P       PT  +       +SR   T+CS+VP +
Sbjct: 68  KKSPQGAPSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSVPTT 111


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 13/54 (24%), Positives = 28/54 (51%)
 Frame = +1

Query: 145 KGDRGYPGPPGICECKPTDNSENERGDSASRPSKTTCSNVPASDPKPQWMGENE 306
           K D   P P    E +PT  +E+E   ++ +P++++ +  P +   P+   E++
Sbjct: 387 KSDEIPPEPVPTPEPQPTQTTESEPTQASEQPTESSTTQKPQTTKTPESGNESD 440


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 473 NPYMFFKEWSANVLHQKD 420
           NPY+F+  +S  +LH+ D
Sbjct: 119 NPYLFYYAFSVALLHRPD 136


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 451 NGLQTYSTRKIVFAS*N 401
           NGLQ Y  R +VF+S N
Sbjct: 790 NGLQCYIDRNVVFSSQN 806


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -3

Query: 467 YMFFKEWSANVLHQKDCFCIVKFFFTKIVF-CENVS*AMHVIF 342
           Y F+  +    +H     CI  F++  ++F C  +   MH++F
Sbjct: 239 YYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLF 281


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 473 NPYMFFKEWSANVLHQKD 420
           NPY+F    S  +LH++D
Sbjct: 119 NPYLFSYALSVAILHRQD 136


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -1

Query: 448 GLQTYSTRKIVFAS*NFSLLKLFFAKTFREQ 356
           GL+  + RKI+  + +FS+L+ F A  F E+
Sbjct: 127 GLKWQTRRKILTPAFHFSILQQFVA-IFNEE 156


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -1

Query: 448 GLQTYSTRKIVFAS*NFSLLKLFFAKTFREQ 356
           GL+  + RKI+  + +FS+L+ F A  F E+
Sbjct: 127 GLKWQTRRKILTPAFHFSILQQFVA-IFNEE 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,546
Number of Sequences: 336
Number of extensions: 4068
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)