Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_L03
         (571 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.34 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           24   1.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   1.4  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   1.4  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   4.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   4.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   5.6  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   5.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   5.6  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.4  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 273  TGENAAISGTKENEEPKDLMADEETKDHRV 362
            T  N  I G K    P D   DE TKD ++
Sbjct: 1127 TAANGVIKGYKVIYGPSDTWFDENTKDTKI 1156


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -1

Query: 106 PEEYQKSSGHKM*RVKARTRRARHGCATLLDHRPA 2
           P++   S   +  R + R ++  +G ATL  H PA
Sbjct: 80  PQQQPASVARRNARERNRVKQVNNGFATLRQHIPA 114


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 508 QALKAFFSVRSWNTSITRWTLYTG 437
           QALK     R  +  +TRWTL  G
Sbjct: 675 QALKFLSRCRLLSERLTRWTLILG 698


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 518 GGVNSRGAKGDQGDGG 565
           GG    G  GD+GDGG
Sbjct: 92  GGGRGGGRDGDRGDGG 107


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = -1

Query: 520 TFSCQALKAFFSVRSWNTSITRWTLYTGNALNSINTTTAVQSW 392
           TFS    K     R W   + +  L+TG  + S      ++ W
Sbjct: 168 TFSNFGYKQCVENRKWQNKVIQKFLWTGGLVTSALFAYGLRIW 210


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = -1

Query: 520 TFSCQALKAFFSVRSWNTSITRWTLYTGNALNSINTTTAVQSW 392
           TFS    K     R W   + +  L+TG  + S      ++ W
Sbjct: 401 TFSNFGYKQCVENRKWQNKVIQKFLWTGGLVTSALFAYGLRIW 443


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = -1

Query: 520 TFSCQALKAFFSVRSWNTSITRWTLYTGNALNSINTTTAVQSW 392
           TFS    K     R W   + +  L+TG  + S      ++ W
Sbjct: 401 TFSNFGYKQCVENRKWQNKVIQKFLWTGGLVTSALFAYGLRIW 443


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 480 LTEKKAFKAWQEK 518
           +TE K F+ W+EK
Sbjct: 471 ITESKNFEPWREK 483


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 177 KEA*ALRASQAFKGTTEQMDLKEELVYPVCRETGEN 284
           +EA  +  S   KG+ +Q   + +L +  C+  G N
Sbjct: 35  REATKITLSSLAKGSLKQYTCELKLWWEFCQRNGHN 70


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 270 ETGENAAISGTKENEEPK 323
           + GEN  IS  K N++PK
Sbjct: 216 QNGENQWISVMKVNKQPK 233


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 482 KVLEYLYHQVDL 447
           K++EY+ H VDL
Sbjct: 184 KIIEYMNHLVDL 195


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 482 KVLEYLYHQVDL 447
           K++EY+ H VDL
Sbjct: 185 KIIEYMNHLVDL 196


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 482 KVLEYLYHQVDL 447
           K++EY+ H VDL
Sbjct: 185 KIIEYMNHLVDL 196


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 76  CARCSSDILLESNSCFYSGL 135
           CA CSSDI L     F++GL
Sbjct: 934 CATCSSDIQL-----FFAGL 948


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +1

Query: 76  CARCSSDILLESNSCFYSGL 135
           CA CSSDI L     F++GL
Sbjct: 934 CATCSSDIQL-----FFAGL 948


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,810
Number of Sequences: 336
Number of extensions: 2609
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)