Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_L02
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           25   0.47 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.7  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   7.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   7.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.7  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 629 QRRVFTTHMGFVITRDKTPASAAASMWRPGPS 534
           + RV   + GF   R   PAS AA+    GPS
Sbjct: 95  RNRVKQVNNGFATLRQHIPASVAAAFAPQGPS 126


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 152 FVKAFCGDLIFTYIYRHTLSQNSLTKL 72
           F  +FC  L F Y+Y    S  + +KL
Sbjct: 11  FFFSFCCILFFIYLYWQQTSNLTTSKL 37


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 13/50 (26%), Positives = 18/50 (36%)
 Frame = -2

Query: 683 TIPLYLLLSATCSSLYWRQRRVFTTHMGFVITRDKTPASAAASMWRPGPS 534
           T+ LY +L A C            +H   V+          A+   PGPS
Sbjct: 126 TLELYTVLGAACQVCTPNATNTVWSHCQCVLADGVERGILTANRMIPGPS 175


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 13/50 (26%), Positives = 18/50 (36%)
 Frame = -2

Query: 683 TIPLYLLLSATCSSLYWRQRRVFTTHMGFVITRDKTPASAAASMWRPGPS 534
           T+ LY +L A C            +H   V+          A+   PGPS
Sbjct: 126 TLELYTVLGAACQVCTPNATNTVWSHCQCVLADGVERGILTANRMIPGPS 175


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
 Frame = +3

Query: 603 HMGREDSPLPPV---QRGARGRQQEIQGDGRRPSEXLQN 710
           H+G   +P       Q   R +++ +QGDGR     + N
Sbjct: 145 HLGASSTPTNSCMEYQHLHRYKEEALQGDGRMRQHVMHN 183


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 390 YKSATETIITGYRGRPSIIHSKSNFY*IQRVQY 292
           +K   ETI+   R     IH+K  +  +Q ++Y
Sbjct: 15  HKDVQETILQEMRDVLGDIHAKPTYSDLQNLKY 47


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
 Frame = +3

Query: 603 HMGREDSPLPPV---QRGARGRQQEIQGDGRRPSEXLQN 710
           H+G   +P       Q   R +++ +QGDGR     + N
Sbjct: 145 HLGASSTPTNSCMEYQHLHRYKEEALQGDGRMRQHVMHN 183


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
 Frame = +3

Query: 603 HMGREDSPLPPV---QRGARGRQQEIQGDGRRPSEXLQN 710
           H+G   +P       Q   R +++ +QGDGR     + N
Sbjct: 145 HLGASSTPTNSCMEYQHLHRYKEEALQGDGRMRQHVMHN 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,215
Number of Sequences: 336
Number of extensions: 4778
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)