Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_K21
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   1.8  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    24   4.1  
AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450 CY...    24   5.4  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +1

Query: 424 TTEFK-VLKKQKKRNDIPKVNNEEPNLSSELRVNEFNIQMISKNIYE 561
           T E K V+KK +++ ++  V ++   L + L+ +  +++   KNI E
Sbjct: 695 TEELKEVMKKTRRQGELTTVESQIRGLENRLKYSMNDLETSKKNINE 741


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
 Frame = +1

Query: 406 LSDVLPTTEFKVLKKQKKRNDIPKV---NNEEPNL 501
           + +VLPT   ++ +K +   DIP++   N   PNL
Sbjct: 67  VEEVLPTDPLELHEKLENETDIPRMVVQNISRPNL 101


>AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 531

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 373 KNCVFSN*YMLSFYVVFSF*ISKFLRGSSQRLAIPIR 263
           +NC+ S   ++    VF F ++ FL  +  R   PIR
Sbjct: 473 RNCIGSRFALMETKAVFFFLLTHFLLEAGPRTQHPIR 509


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,227
Number of Sequences: 2352
Number of extensions: 12892
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)