Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_K19
         (356 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   0.71 
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    21   3.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   6.6  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    20   8.7  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    20   8.7  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 0.71
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 8   PNCLFDGRLC 37
           P CLFDGR C
Sbjct: 550 PECLFDGRDC 559


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
          protein 20 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 11 NCLFDGRLCTVDG 49
          NCL + + CT DG
Sbjct: 47 NCLLEKKPCTPDG 59


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 209 KRYTAL*LLVVICSCV 256
           K +  L  L+++C CV
Sbjct: 262 KNFVCLLSLIILCDCV 277


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
          protein 18 protein.
          Length = 124

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 11 NCLFDGRLCTVDG 49
          NCL D   CT +G
Sbjct: 43 NCLLDKGRCTPEG 55


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
          protein 11 protein.
          Length = 127

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 11 NCLFDGRLCTVDG 49
          NCL +   CT DG
Sbjct: 48 NCLLEKGKCTPDG 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,376
Number of Sequences: 336
Number of extensions: 530
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)