Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_K16
         (446 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    31   0.007
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    27   0.081
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     20   9.3  

>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 30.7 bits (66), Expect = 0.007
 Identities = 12/17 (70%), Positives = 16/17 (94%)
 Frame = +3

Query: 183 IYKLIQNEAEKLLLCQK 233
           IYK+IQNEA+KL+ C+K
Sbjct: 49  IYKIIQNEAQKLVDCEK 65



 Score = 26.6 bits (56), Expect = 0.11
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +2

Query: 38  MYKFTILFLVLACFIMAEAQLTFTSSWGGKRAAIAGTVSCRN--DESLCVY 184
           M++  +  L++    +  AQL FT +W GKRA    +  C+   D  + +Y
Sbjct: 1   MHRVLLTVLLITIVGLCAAQLNFTPNW-GKRAPEGESNRCKESVDTIMLIY 50


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 27.1 bits (57), Expect = 0.081
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 56  LFLVLACFI-MAEAQLTFTSSWGGKRAAIAGT 148
           L +VL  F+ +  AQL F++ WG +  + AG+
Sbjct: 6   LIVVLIAFVGVCTAQLNFSTDWGKRSGSSAGS 37


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 102 LSHPAGVEKGLPSPAL 149
           L HPA     L SPA+
Sbjct: 119 LPHPAAAHSALLSPAM 134



 Score = 20.2 bits (40), Expect = 9.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 215 TPAMPEALSRH 247
           +PAMP  L+RH
Sbjct: 131 SPAMPHNLTRH 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,550
Number of Sequences: 336
Number of extensions: 1904
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)