Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_K15
(836 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0992 + 25083397-25083537,25084198-25084228,25084971-250851... 48 9e-06
06_01_0579 + 4099039-4099086,4099798-4099848,4100151-4100286,410... 46 5e-05
12_02_0498 + 19721038-19721178,19721376-19721472,19721576-197216... 43 3e-04
10_08_0547 - 18682357-18682683,18682971-18683060,18683279-186833... 40 0.003
03_02_0476 + 8768182-8768313,8768734-8768833,8768949-8768986,876... 39 0.004
04_04_0611 - 26594737-26594991,26595307-26595396,26595490-265955... 39 0.006
06_01_0926 - 7139220-7139318,7139394-7139478,7139573-7139643,713... 37 0.017
02_05_0094 - 25758213-25758479,25758886-25758975,25759090-257591... 37 0.017
03_05_0383 + 23656041-23656096,23657189-23657255,23657599-236577... 33 0.21
03_02_0490 - 8840577-8840914,8841009-8841067,8841168-8841283,884... 32 0.49
12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331,729... 31 1.1
08_02_1145 - 24674319-24674403,24674691-24674746,24674885-246749... 31 1.5
08_02_1406 - 26854845-26855606 30 2.0
07_01_0611 + 4524866-4525047,4525406-4525468,4525701-4525761,452... 30 2.0
07_01_1105 - 10173039-10173156,10173715-10173716,10174550-101745... 30 2.6
02_05_0347 - 28155272-28155437,28155518-28155792 30 2.6
07_01_0427 + 3255857-3255922,3257061-3257180,3257382-3257403,325... 29 3.5
06_01_0847 - 6451525-6451678,6452870-6453066,6454300-6454591,645... 29 6.1
03_05_0786 + 27691451-27691688,27692376-27692479,27692600-276926... 28 8.0
01_06_1748 + 39632040-39632065,39632748-39633051,39633147-396331... 28 8.0
01_05_0529 + 22982859-22983041,22983146-22983597,22983598-22983892 28 8.0
>12_02_0992 +
25083397-25083537,25084198-25084228,25084971-25085139,
25085228-25085291,25085408-25085474,25086543-25086586,
25086835-25086922,25087079-25087238,25087659-25087779,
25087859-25087942,25088043-25088162,25088689-25088901,
25088995-25089054,25089144-25089262,25089407-25089465,
25089585-25089919
Length = 624
Score = 48.0 bits (109), Expect = 9e-06
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 206 CVKCNKIITQGG-VTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAKR 382
C C I G ++ + WH +CF C CN ++ F +++PY C+ + F +
Sbjct: 257 CAGCKNPIGHGRFLSCMDSVWHPQCFRCFACNKPISEYEFAMHEDQPYHKSCYKDFFHPK 316
Query: 383 CTSC 394
C C
Sbjct: 317 CDVC 320
Score = 35.5 bits (78), Expect = 0.053
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +2
Query: 281 TCTNCNTSLAGQRFTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFEDRHWHN 460
TC C + RF S + + +CF RC +C KPI+ F ED+ +H
Sbjct: 256 TCAGCKNPIGHGRFLSCMDSVWHPQCF------RCFACNKPISEY---EFAMHEDQPYHK 306
Query: 461 DCF 469
C+
Sbjct: 307 SCY 309
Score = 35.1 bits (77), Expect = 0.070
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 359 FGELFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQC 484
F ++ C C PI G RF+S D WH CF C C
Sbjct: 249 FASSGSRTCAGCKNPI---GHGRFLSCMDSVWHPQCFRCFAC 287
>06_01_0579 +
4099039-4099086,4099798-4099848,4100151-4100286,
4100287-4100401,4100496-4100528,4101037-4101166,
4101663-4101751,4102042-4102148,4102238-4102309,
4102384-4102764,4104907-4105064,4105581-4105674,
4106082-4106089,4106297-4106387,4107136-4107289,
4108257-4108377,4108468-4108551,4108946-4109065,
4109181-4109393,4109482-4109544,4109668-4109783,
4110132-4110190,4111126-4111445
Length = 920
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +2
Query: 206 CVKCNKIITQGG-VTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAKR 382
C C+ I G ++ WH ECF C CN + F+ PY C+ E F +
Sbjct: 558 CAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTCYKERFHPK 617
Query: 383 CTSCTKPI-TGIGG 421
C C + I T + G
Sbjct: 618 CDVCKQFIPTNMNG 631
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = +2
Query: 368 LFAKRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSLVGKGFITDGQDIICPEC 547
+F+ +C + IG RF+S WH +CF C C + F G C
Sbjct: 550 MFSSGFRTCAGCHSEIGHGRFLSCMGAVWHPECFRCHACNQPIYDYEFSMSGNHPYHKTC 609
Query: 548 AKQK 559
K++
Sbjct: 610 YKER 613
>12_02_0498 +
19721038-19721178,19721376-19721472,19721576-19721619,
19722120-19722203,19722441-19722662
Length = 195
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 200 TRCVKCNKII-TQGGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFA 376
T+C+ C+K + +T N +H+ CF C +C +L + S + YC F +LF
Sbjct: 10 TKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLF- 68
Query: 377 KRCTSCTKPITG 412
KR S K G
Sbjct: 69 KRTGSLDKSFEG 80
Score = 37.1 bits (82), Expect = 0.017
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 203 RCVKCNKIITQ-GGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYC 349
+CV CNK + VT N +H+ CF C + +++ + + + K YC
Sbjct: 109 KCVGCNKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYC 158
>10_08_0547 -
18682357-18682683,18682971-18683060,18683279-18683301,
18683397-18683496,18683615-18683749
Length = 224
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 203 RCVKCNKIITQGGV-TYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAK 379
+C C+K + + T + P+H+ CF C++C +L+ ++S D YC F +LF +
Sbjct: 9 KCNACDKTVHFIDLLTADSIPYHKSCFRCSHCKGTLSMCSYSSMDGVLYCKTHFEQLFKE 68
Query: 380 RCT 388
T
Sbjct: 69 TGT 71
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +2
Query: 203 RCVKCNKIITQ-GGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAK 379
+C C K + +T + E +HR CF C + L + S + YC F +LF K
Sbjct: 103 KCTACKKTVYPLEKMTMEGECYHRTCFKCAHGGCLLTNASYASHNGILYCQNHFWQLFKK 162
>03_02_0476 +
8768182-8768313,8768734-8768833,8768949-8768986,
8769102-8769191,8769465-8769695
Length = 196
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 203 RCVKCNKII-TQGGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELF 373
+C C K + ++ +HR CF C +C ++L+ ++S + PYC F +LF
Sbjct: 8 KCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCKPHFEQLF 65
Score = 35.5 bits (78), Expect = 0.053
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 203 RCVKCNKIITQ-GGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAK 379
+C C+K VT + + +H+ CF C++ +++ + + + YC F +LF +
Sbjct: 107 KCATCSKTAYPLEKVTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKE 166
Query: 380 R 382
+
Sbjct: 167 K 167
>04_04_0611 -
26594737-26594991,26595307-26595396,26595490-26595515,
26595603-26595702,26595820-26595954
Length = 201
Score = 38.7 bits (86), Expect = 0.006
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 203 RCVKCNKIITQGGV-TYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELF 373
+C C+K + + T P+H+ CF C++C L+ ++S D YC F +LF
Sbjct: 9 KCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTHFEQLF 66
Score = 36.7 bits (81), Expect = 0.023
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 203 RCVKCNKIITQ-GGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAK 379
+C C K + +T + E +H+ CF C++ L + + + YC FG+LF +
Sbjct: 104 KCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFME 163
Query: 380 R 382
+
Sbjct: 164 K 164
>06_01_0926 -
7139220-7139318,7139394-7139478,7139573-7139643,
7139996-7140076,7140805-7140895,7141242-7141330,
7141749-7141802,7141906-7142085,7142175-7142237,
7142575-7142705,7142807-7142900,7143343-7143684,
7143957-7144348,7145010-7148487,7149101-7149187,
7149324-7149367,7149495-7149591,7150429-7150572
Length = 1873
Score = 37.1 bits (82), Expect = 0.017
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +2
Query: 203 RCVKCNKIITQ-GGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELF 373
+CV CNK + V +H+ CF CT+ +L+ + + K YC +LF
Sbjct: 111 KCVVCNKTVYPLEKVNLNGSSYHKSCFRCTHGGCTLSPSNNVTHEGKLYCKTHHSQLF 168
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 263 WHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAKRCTSCTKPITG 412
+HR CF CT+C +L ++S + YC + ++ K S K G
Sbjct: 33 YHRPCFRCTHCKATLQFSNYSSVEGVLYCKPHYDQIL-KSTGSLEKSFEG 81
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +2
Query: 377 KRCTSCTKPITGIGGTRFISFEDRHWHNDCFICAQCKTSL 496
++C SC + + + ++ + R +H CF C CK +L
Sbjct: 11 QKCDSCGRTVYPV---EELAADGRVYHRPCFRCTHCKATL 47
>02_05_0094 -
25758213-25758479,25758886-25758975,25759090-25759118,
25759208-25759307,25759411-25759545
Length = 206
Score = 37.1 bits (82), Expect = 0.017
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +2
Query: 203 RCVKCNK------IITQGGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFG 364
+C C+K ++T GV+Y H+ CF C++C +L+ ++S D YC F
Sbjct: 9 KCKACDKTVHFIDLLTADGVSY-----HKTCFKCSHCKGTLSMCNYSSMDGVLYCKTHFE 63
Query: 365 ELF 373
+LF
Sbjct: 64 QLF 66
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 203 RCVKCNKIITQ-GGVTYKNEPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAK 379
+C C K + +T + E +H+ CF C++ L + + + YC F +LF +
Sbjct: 105 KCAACQKTVYPLEKLTLEGESYHKSCFKCSHGGCILTTSSYAALNGILYCKIHFSQLFKE 164
Query: 380 R 382
+
Sbjct: 165 K 165
>03_05_0383 +
23656041-23656096,23657189-23657255,23657599-23657745,
23658094-23658178,23658380-23658551,23660056-23660176,
23660431-23660550,23660861-23661073,23661154-23661213,
23661306-23661424,23661609-23661667,23661798-23662132
Length = 517
Score = 33.5 bits (73), Expect = 0.21
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 383 CTSCTKPITGIGGTRFISFEDRHWHNDCFICAQC 484
C C PI G RF+S D WH CF C C
Sbjct: 178 CAGCKTPI---GQGRFLSCMDSVWHPQCFRCFAC 208
>03_02_0490 -
8840577-8840914,8841009-8841067,8841168-8841283,
8841578-8841640,8841826-8842038,8842211-8842330,
8842453-8842578,8842593-8842749,8842830-8842962,
8843054-8843138,8843305-8843421
Length = 508
Score = 32.3 bits (70), Expect = 0.49
Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 2/90 (2%)
Frame = +2
Query: 131 GTKXFIPRXQXXYCAGCYEDKFATRCVKCNKIITQGGVTYKNEPWHRECFTCTNCNTSL- 307
G K I C G Y RC C I + VT+ + EC + + SL
Sbjct: 116 GCKHEIGHGHYLSCLGMYWHPQCFRCSSCRHPIREMEVTFLQ--FSLECLKVFSGSDSLL 173
Query: 308 -AGQRFTSRDEKPYCAECFGELFAKRCTSC 394
+ +FT PY C+ EL +C C
Sbjct: 174 YSVSQFTLLGTDPYHKLCYKELHHPKCDVC 203
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/73 (20%), Positives = 28/73 (38%)
Frame = +2
Query: 263 WHRECFTCTNCNTSLAGQRFTSRDEKPYCAECFGELFAKRCTSCTKPITGIGGTRFISFE 442
WH +CF C++C + T C + F + + + G + ++
Sbjct: 134 WHPQCFRCSSCRHPIREMEVTFLQFSLECLKVFSGSDSLLYSVSQFTLLGTDPYHKLCYK 193
Query: 443 DRHWHNDCFICAQ 481
+ H H C +C Q
Sbjct: 194 ELH-HPKCDVCLQ 205
Score = 28.3 bits (60), Expect = 8.0
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 413 IGGTRFISFEDRHWHNDCFICAQCK 487
IG ++S +WH CF C+ C+
Sbjct: 121 IGHGHYLSCLGMYWHPQCFRCSSCR 145
>12_01_0796 +
7292523-7292783,7292963-7293018,7295274-7295331,
7295777-7295843,7296461-7296516,7296638-7296691,
7296836-7296961
Length = 225
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +1
Query: 436 VRRQTLAQRLLHLRAVQDLARRQGLHHRRTGHHLSRVRQAE 558
V+ + L L HLR A R+G HH HH RVR+AE
Sbjct: 11 VQERRLGVLLSHLRPCAPPAARRGNHHHH--HHDLRVREAE 49
>08_02_1145 -
24674319-24674403,24674691-24674746,24674885-24674965,
24675063-24675137,24675418-24675479,24675857-24675950,
24676674-24676762,24676864-24677194
Length = 290
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 508 ALADERGLALRADEAVVVPVSVFE-RDEAGAADTCDGLGARSAALGEQFPEALGAV 344
A + GL + V+V VS R +A AA C G GA SAA G Q P G V
Sbjct: 20 AASSSSGLTFKLHPLVIVNVSDHHTRVKAQAA--CSGDGASSAAAGGQPPRVFGCV 73
>08_02_1406 - 26854845-26855606
Length = 253
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Frame = +2
Query: 203 RCVKCNKIITQGGVTYKN--EPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAEC 358
RCV+CN + GG + W +C TC + LA RD P C C
Sbjct: 154 RCVECNAVAGGGGGGGRQVVRAWSYQCQTCPDSELCLACA--LGRDGVPPCCCC 205
>07_01_0611 +
4524866-4525047,4525406-4525468,4525701-4525761,
4526212-4526304,4526372-4526489,4527003-4527105,
4527342-4527525,4527974-4528087
Length = 305
Score = 30.3 bits (65), Expect = 2.0
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = -2
Query: 547 ALGTDDVLSVGDEALADERGLA----LRADEAVVVPV--SVFERDEAGAADTCDGLGARS 386
ALG D++ V DE L DE GLA ++A E V ++++EA AA G +
Sbjct: 185 ALGEDEMPDVKDETLPDEEGLARPVVVKAVEEFKASVYGENYDQEEAEAAAAKAGASKKR 244
Query: 385 AALGEQFPEALGA 347
AL + E A
Sbjct: 245 KALTDAAAEKSAA 257
>07_01_1105 - 10173039-10173156,10173715-10173716,10174550-10174584,
10174696-10174765,10175163-10176707,10176770-10178062
Length = 1020
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/86 (24%), Positives = 39/86 (45%)
Frame = -3
Query: 672 YVRCTSQKHLSYINCIACEGWSDARAEALKRDRCIYMSFCLAHSGQMMSCPSVMKPLPTS 493
Y + + L + + A E WS + E + Y+S + G++ P+ P
Sbjct: 878 YFAFPALESLKFRDMGAWEEWSGVKDEHFPELK--YLS--IVRCGKLKVLPNFTSG-PKQ 932
Query: 492 EVLHCAQMKQSLCQCLSSNEMKRVPP 415
+ +C ++ Q LCQ + N M+ +PP
Sbjct: 933 RIRNCEKLLQPLCQNIHWNLMEYIPP 958
>02_05_0347 - 28155272-28155437,28155518-28155792
Length = 146
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 257 EPWHRECFTCTNCNTSLAGQRFTSRDEKPYCAE 355
E H CT C LAG F R + P+C+E
Sbjct: 68 EEAHHFLDECTLCRKGLAGDIFMYRGDTPFCSE 100
>07_01_0427 +
3255857-3255922,3257061-3257180,3257382-3257403,
3257978-3258026,3259119-3259190,3259993-3260068,
3260823-3260894
Length = 158
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -3
Query: 405 MGLVQEVQRLANSSPKHSAQ*GFSSREVNRWPASDVLQF 289
MGLV+E+QR+ S+P+ S + FS+ N W L F
Sbjct: 107 MGLVEEIQRIKTSNPEISHREAFSAAAKN-WAHLPRLHF 144
>06_01_0847 -
6451525-6451678,6452870-6453066,6454300-6454591,
6454622-6454654,6454869-6455102,6455204-6455259,
6455552-6456754
Length = 722
Score = 28.7 bits (61), Expect = 6.1
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Frame = -2
Query: 598 SGSVEARQVYLHELLLGALGTDDVLSVGDEALADERGLALRADE---AVVVPVSVFERDE 428
+GS +VY ++LL+G G ++ + + + D+R AL DE A +P E DE
Sbjct: 289 TGSSTVPKVYFNDLLIG--GLTELKKMEESGILDDRTDALFKDEPSSAAPLPPLPGEDDE 346
Query: 427 AGA 419
+G+
Sbjct: 347 SGS 349
>03_05_0786 +
27691451-27691688,27692376-27692479,27692600-27692671,
27693231-27693404,27693603-27693726,27695154-27695200,
27695381-27695593
Length = 323
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = -3
Query: 669 VRCTSQKHLSYINCIACEGWSDAR-AEALK 583
+RC S KHL I+ + CEGWS + A ALK
Sbjct: 279 LRCAS-KHLKDISGMDCEGWSLLKIATALK 307
>01_06_1748 +
39632040-39632065,39632748-39633051,39633147-39633192,
39633228-39633314,39634083-39634285
Length = 221
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = -2
Query: 535 DDVLSVGDEALADERGLALRADEAVVVPVSVFERDE 428
+D + G+E A+E G+ +D+ +VP V+++++
Sbjct: 184 EDDFNSGEEDEANEEGIDFESDKDEIVPTKVYDQED 219
>01_05_0529 + 22982859-22983041,22983146-22983597,22983598-22983892
Length = 309
Score = 28.3 bits (60), Expect = 8.0
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2
Query: 242 VTYKNEPWHRECFTCTNCNTSLAGQR 319
+ K+ PW +E TC +C + G R
Sbjct: 194 IASKHHPWRKESLTCCSCRYVIDGYR 219
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,872,798
Number of Sequences: 37544
Number of extensions: 377150
Number of successful extensions: 1295
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1292
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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