Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_K10
(730 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785... 33 0.18
03_06_0318 + 33103467-33104232,33104332-33105548 31 0.71
01_06_1547 - 38150814-38151488,38151608-38151666,38151774-381519... 31 0.71
09_03_0217 + 13532018-13532405,13532706-13533175 31 0.94
12_02_0404 - 18633355-18633783,18634215-18634232 30 1.6
01_01_0946 - 7442907-7443284,7443797-7445122 30 2.2
05_07_0035 - 27221338-27221433,27221510-27221599,27222056-272221... 29 2.9
04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965... 29 2.9
01_05_0308 + 20710454-20710570,20710917-20710999,20711114-207112... 29 2.9
11_06_0080 - 19880319-19880957,19881800-19881948,19882266-198835... 29 5.0
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 28 6.6
09_03_0008 - 11451631-11451688,11451837-11452377,11452620-11452692 28 6.6
03_05_1011 + 29658144-29658310,29659531-29659676,29660526-296606... 28 6.6
09_04_0233 - 15890085-15890234,15890345-15890551,15891112-158913... 28 8.7
07_03_1360 - 25991173-25991261,25991496-25991586,25992318-259924... 28 8.7
01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437... 28 8.7
>04_04_1250 +
32077590-32078000,32078132-32078308,32078437-32078561,
32078629-32078761,32078866-32079015,32079105-32079158,
32079437-32079532,32080021-32080095,32080723-32080824,
32080903-32081589,32081686-32081817,32081916-32082023,
32082170-32082319
Length = 799
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/81 (24%), Positives = 40/81 (49%)
Frame = +2
Query: 437 NLSSPNIKLEVNTEDHKEESGQYSLVSDNLETSTENNEDFPKFDEVADVDVIIEESVGEP 616
NL + +++T++ +E Q S D+ E E+ + E D ++ ++ + E
Sbjct: 515 NLDGSSEANKLDTDEGMKEEDQLSGDEDDTEELDEDQDISDNDSEENDDELELDSDMDEE 574
Query: 617 NDITQIQDDSSLDYFPEIDDS 679
ND+++ DD L ++DDS
Sbjct: 575 NDVSESDDDEELS--EKLDDS 593
>03_06_0318 + 33103467-33104232,33104332-33105548
Length = 660
Score = 31.5 bits (68), Expect = 0.71
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Frame = +2
Query: 464 EVNTEDHKEESGQYSLVSDNLETSTEN-NEDFP------KFDEVADVDVIIEESVGEPND 622
E+ T D + E Q+ V+ L+ + +N EDF KF V D I ++ V + +D
Sbjct: 145 ELKTSDSESEPWQHGGVASLLDDAVDNLKEDFTLSHPKTKFAGVIPTDDIAQDQVAKNSD 204
Query: 623 ITQIQDDSS 649
+ Q+Q+ S
Sbjct: 205 LIQLQNGGS 213
>01_06_1547 -
38150814-38151488,38151608-38151666,38151774-38151919,
38152078-38152274,38152542-38152920,38153000-38153031
Length = 495
Score = 31.5 bits (68), Expect = 0.71
Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Frame = +2
Query: 461 LEVNTEDHKEESGQYSLVSDNLETSTENNEDFPKFDEVADVDVIIEESVGEPNDITQ--- 631
LE + D ++ + +D +++ EN+ D P D+ D+++I+ V E ++
Sbjct: 219 LEASDSDSEDGEDPNNASADE-QSTIENSADIPSGDDDEDLEMIVVRDVNEGEEVFNTYG 277
Query: 632 IQDDSSLDY---FPEIDDSYRFASVD 700
+++L + F E+D+SY ++D
Sbjct: 278 TMGNAALLHRYGFTEMDNSYDIVNID 303
>09_03_0217 + 13532018-13532405,13532706-13533175
Length = 285
Score = 31.1 bits (67), Expect = 0.94
Identities = 23/73 (31%), Positives = 39/73 (53%)
Frame = +2
Query: 461 LEVNTEDHKEESGQYSLVSDNLETSTENNEDFPKFDEVADVDVIIEESVGEPNDITQIQD 640
LE + ++ E+SG VSD E S ++ED + E D D I E++ D++ D
Sbjct: 32 LEESDDEDNEKSGDDDDVSDEDEFSETSDED--ESTEETDDDGISEDN---KIDVSGDDD 86
Query: 641 DSSLDYFPEIDDS 679
D++ D E++D+
Sbjct: 87 DNTTDEAKEVNDT 99
>12_02_0404 - 18633355-18633783,18634215-18634232
Length = 148
Score = 30.3 bits (65), Expect = 1.6
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +2
Query: 392 VTVFASPAIRQEIDSNLSSP-NIKLEVNTEDHKEESGQYSLVS--DNLETSTENNEDFPK 562
V F + +R S P NI E + +D KEE+ + S S D E ENNED
Sbjct: 80 VAKFKTRELRMFSYIETSEPLNIYKEEDNKDKKEEAEESSSSSLKDEEEEEEENNEDEDT 139
Query: 563 FDEVADVD 586
+EVA V+
Sbjct: 140 EEEVAVVN 147
>01_01_0946 - 7442907-7443284,7443797-7445122
Length = 567
Score = 29.9 bits (64), Expect = 2.2
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Frame = +2
Query: 416 IRQEIDSNLSSPNIKLEVNTEDHKEESGQYSLVSDNLETSTENNEDFPKFDEVADVDVII 595
++QEI N+ SPN E T + E+ + +L+S ET+T + + E + + I
Sbjct: 139 MKQEISRNVESPNGIGESMTLVNGEKLDESTLISTICETNTSDTDFLANKSENFNGNEIE 198
Query: 596 E--ESVGEPNDI-TQIQDDSSLDYFPEID 673
E E + +DI +Q D + + +P I+
Sbjct: 199 ESFEQLSISSDIGNNLQFDDAKEKYPLIE 227
>05_07_0035 -
27221338-27221433,27221510-27221599,27222056-27222115,
27222231-27222523,27222601-27222757,27222917-27223261,
27223890-27224020,27224119-27224596,27224817-27225563
Length = 798
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 425 EIDSNLSSPNIKLEVNTEDHKEESGQYSLVSDNLETSTEN-NEDFPKFDEVADVD 586
E+++N+ + L + ++ EE G S +N S+ +ED FDE +D D
Sbjct: 725 ELENNIRQMKLDLGIEVDEEYEEDGSDSENENNEAVSSARYDEDQDDFDESSDED 779
>04_04_1630 - 34896021-34896143,34896329-34896403,34896500-34896556,
34897176-34897352,34897426-34897492,34898043-34898101,
34898188-34898241,34898455-34898604,34898709-34898918,
34898980-34899039,34899399-34899527,34899616-34899720,
34899935-34900024,34900630-34900695,34901047-34901115,
34901348-34901467,34901572-34901634,34901681-34901817,
34902070-34902160,34902298-34902463,34902700-34904172,
34905666-34905940,34906322-34906819,34906996-34907145,
34907840-34907911,34908006-34908266,34908478-34908558,
34908745-34908996,34909323-34909382,34909602-34909853,
34910385-34910549,34910589-34910849,34911267-34912307,
34913398-34913457,34914055-34914165,34914448-34914534,
34915227-34915300,34915397-34915490,34915644-34915689,
34916397-34916521
Length = 2501
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/141 (19%), Positives = 65/141 (46%), Gaps = 7/141 (4%)
Frame = +2
Query: 254 RKLELKEGMARYK--AEHNITHRTALISDIGDTIKMYPRALFILWLGLVTVFASPAIRQE 427
+K+EL++ + R AE + + D+ + + + +A+ + + Q+
Sbjct: 1583 KKMELQKEVDRLTELAERALLDASKAEEDVANIMVLAEQAVALEMEAAQRANDAELALQK 1642
Query: 428 IDSNLSSPNIKLEVNTEDHKEESGQYSLVSDNLETSTENNEDFPKFDEVADVD-----VI 592
+ +SS + +E+ ++ S + VS+ + S++ +D P+ DEV++V+ +
Sbjct: 1643 AEKAISSVDAVVELPAPAEEQVSDEEDNVSEVYDYSSDAIDDIPERDEVSNVERLTVGDL 1702
Query: 593 IEESVGEPNDITQIQDDSSLD 655
E + + ++ DD S D
Sbjct: 1703 AVEGIEQLESSREMSDDESTD 1723
>01_05_0308 +
20710454-20710570,20710917-20710999,20711114-20711264,
20711369-20711468,20711592-20711684,20711891-20711939,
20712024-20712121,20712300-20712406,20712498-20712671
Length = 323
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/70 (27%), Positives = 29/70 (41%)
Frame = +2
Query: 275 GMARYKAEHNITHRTALISDIGDTIKMYPRALFILWLGLVTVFASPAIRQEIDSNLSSPN 454
GM+ E T + SD +KM L+ + +QE+ +NL +
Sbjct: 17 GMSSSTLEEVQMQETLIFSDTIKDLKMLKSQLYSAAEYFELAYTQEDDKQEVMNNLKEYS 76
Query: 455 IKLEVNTEDH 484
+K VNT DH
Sbjct: 77 VKALVNTVDH 86
>11_06_0080 - 19880319-19880957,19881800-19881948,19882266-19883589,
19883766-19883953,19884034-19884499
Length = 921
Score = 28.7 bits (61), Expect = 5.0
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +2
Query: 404 ASPAIRQEIDSNLSSPNIKLEVNTEDHKEESGQYSLVSDNLETSTENNEDFPKFDEVADV 583
A + E LS IKLE N+E+ +++ +L + +N+ D DE D
Sbjct: 831 AQDTVANEEPGQLSG--IKLEDNSEERQKQPSTTNLSEQSRVAIQKNSNDDDDDDE--DE 886
Query: 584 DVIIEESVGEPNDITQIQDDSSLDYFP-EIDDS 679
+ EE+ G N + I DD + + E DD+
Sbjct: 887 WLEEEETGGAGNTMIPIADDEDVSFSDLEEDDA 919
>11_01_0219 -
1710206-1710246,1710479-1710620,1710699-1710752,
1710838-1710909,1711631-1711699,1711807-1711848,
1711946-1712014,1712130-1712267,1712390-1712500,
1712576-1712726,1713720-1713775,1714076-1714753
Length = 540
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +2
Query: 458 KLEVNTEDHKEESGQYSLVSDNLETSTENNEDFPKFDEVADVDVIIEESVGEPNDITQIQ 637
K + TE+ EE S++ E E+ ED + ++ D D EE G DI +
Sbjct: 193 KKKKKTENWMEEDSD----SEDEEYLDEDEEDDDEHLDLEDFDDEEEEEEGAVGDIMKDD 248
Query: 638 DDSSLDYFPEIDD 676
D+F E DD
Sbjct: 249 FSRYKDFFQEADD 261
>09_03_0008 - 11451631-11451688,11451837-11452377,11452620-11452692
Length = 223
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 365 ALFILWLGLVTVFASPAIRQEIDSNLSSPNIKLEVNTEDHKEESGQYSLVSDNLETSTEN 544
ALF+ +V ASPA+ Q + + S + LE N +K+ VSD+ T
Sbjct: 2 ALFLFLAAIVLAAASPAVGQ-LPAGFLSIDCGLEANYSGYKDTDTGIVYVSDDPYVDTGK 60
Query: 545 N 547
N
Sbjct: 61 N 61
>03_05_1011 +
29658144-29658310,29659531-29659676,29660526-29660602,
29660682-29660804,29661817-29661924,29661995-29662075,
29662157-29662309,29662469-29662540,29662745-29662863,
29662958-29663071,29663176-29663221,29664865-29664933,
29665662-29665808,29666410-29666706
Length = 572
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +2
Query: 416 IRQEIDSNLSSPNIKLEVNTEDHKEESGQYSLVSDNLETSTENNEDFPKFDEVADVDVII 595
+ +++D I +++NT + SG+Y T + ++ P +D+D I
Sbjct: 468 VDRKLDHFYLDKEISMDINTRPPRRRSGRY--------TQAKTSQHMP-----SDID--I 512
Query: 596 EESVGEPNDITQIQDDSSLDYFPEIDDSY 682
+S+ +PN + D S LD F D+ Y
Sbjct: 513 RDSLDKPNPVPAEADKSDLDEF-IFDEEY 540
>09_04_0233 -
15890085-15890234,15890345-15890551,15891112-15891356,
15891618-15891831,15892890-15893036
Length = 320
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 398 VFASPAIRQEIDSNLSSPNIKLEVNTEDHKEES 496
+F P ++ +D N S P + E+ T+DH ES
Sbjct: 261 LFHPPCLKPWLDENNSCPICRHELRTDDHVYES 293
>07_03_1360 -
25991173-25991261,25991496-25991586,25992318-25992409,
25992586-25992673,25992826-25992888,25992975-25993086,
25993255-25993335,25993437-25993541,25993652-25993698,
25993793-25993912
Length = 295
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 90 RPVFSAGSFYNCSWKAVGXVNGCGKNRK*RIVGSCGISESFFTEI 224
RPVF+A +FY C+ + V+ K +++ CG S S FT +
Sbjct: 139 RPVFTAAAFYLCAKRHKLKVD------KLKLIDLCGTSSSEFTTV 177
>01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,
4378900-4378970,4379038-4379144,4379241-4379711,
4379791-4379976,4380132-4380425,4380820-4381434,
4382219-4382615,4382768-4382850,4383397-4383567,
4384046-4384243,4384754-4385314,4385401-4385460,
4385553-4385869,4385980-4386403,4386539-4387006,
4387093-4387209,4387306-4387427,4387506-4388247,
4388453-4388485,4388625-4388879,4388975-4389160,
4390115-4390453,4391293-4392045
Length = 3017
Score = 27.9 bits (59), Expect = 8.7
Identities = 20/83 (24%), Positives = 36/83 (43%)
Frame = +2
Query: 368 LFILWLGLVTVFASPAIRQEIDSNLSSPNIKLEVNTEDHKEESGQYSLVSDNLETSTENN 547
L + WL +SP + ++ + L V +E + G+Y+ S +T NN
Sbjct: 2235 LSLQWLSGTMTNSSPVYPLHLLRDIETRVWLLAVESESQCKADGEYAPSSVTQNLATGNN 2294
Query: 548 EDFPKFDEVADVDVIIEESVGEP 616
+ ++ ADV I+ S+ P
Sbjct: 2295 TNI--IEQTADVITKIDNSMSSP 2315
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,057,661
Number of Sequences: 37544
Number of extensions: 290663
Number of successful extensions: 746
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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