Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_K10
         (730 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           30   0.084
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    26   1.4  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   1.8  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    25   3.2  
AY724807-1|AAW50316.1|  127|Anopheles gambiae G protein alpha su...    24   5.5  
AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450 CY...    24   5.5  
Z69979-1|CAA93819.1|  127|Anopheles gambiae vacuolar ATPase prot...    23   9.7  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   9.7  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 29.9 bits (64), Expect = 0.084
 Identities = 16/62 (25%), Positives = 26/62 (41%)
 Frame = +2

Query: 407 SPAIRQEIDSNLSSPNIKLEVNTEDHKEESGQYSLVSDNLETSTENNEDFPKFDEVADVD 586
           S +   +ID +  SP +  +  T   K          +    STENNED    D + +V 
Sbjct: 501 SDSSESDIDDDCRSPRLDRKRKTGTKKRNPSSNDRSPNQNSDSTENNEDLAYLDTLPEVK 560

Query: 587 VI 592
           ++
Sbjct: 561 LV 562


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +2

Query: 476 EDHKEESGQYSLVSDNLETSTENNEDFPKFDEVADVDVIIEE 601
           E+H EE  +    +D  E     +E+  + DE+ +  ++ EE
Sbjct: 77  EEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEE 118


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 15/62 (24%), Positives = 30/62 (48%)
 Frame = +3

Query: 531 HRQRIMKTSQNLMKLPMLTSS*KSLSENQMTSHRFRMTQVWTIFLKLTTLIDSHLSIKLX 710
           H++  M T  +L+K        +S     M +H FRM ++++  +     +DS L + + 
Sbjct: 88  HQKTTMSTKVSLLKKLCKAEYDES---GDMEAHLFRMDELFSSLMNAGQELDSSLKVAMV 144

Query: 711 MK 716
           +K
Sbjct: 145 LK 146


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = +3

Query: 528 RHRQRIMKTSQNLMKLPMLTSS 593
           RHRQ++++ + ++ KLP+  SS
Sbjct: 434 RHRQKMVRKNPSVAKLPISCSS 455


>AY724807-1|AAW50316.1|  127|Anopheles gambiae G protein alpha
           subunit AgGq5 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 650 LDYFPEIDDSYRFASV-DKVEXEIMDTA 730
           +DYFPE DD+     V   V+  IM TA
Sbjct: 97  VDYFPEYDDTENIKLVFCAVKDTIMQTA 124


>AY062208-1|AAL58569.1|  503|Anopheles gambiae cytochrome P450
           CYP6M1 protein.
          Length = 503

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 572 VADVDVIIEESVGEPNDITQIQDDSSLDYFPEIDDSYRFASVDKVE 709
           V D D +IE        I  IQ D+SL   PE  D  RF++ ++ +
Sbjct: 382 VPDTDSVIEAGTMLFIPIFSIQRDASLFPEPEKFDPERFSAEEEAK 427


>Z69979-1|CAA93819.1|  127|Anopheles gambiae vacuolar ATPase
           protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 15/70 (21%), Positives = 35/70 (50%)
 Frame = +2

Query: 305 ITHRTALISDIGDTIKMYPRALFILWLGLVTVFASPAIRQEIDSNLSSPNIKLEVNTEDH 484
           +  +   +S+I D  K + +   I  + +   +A   IR  IDS+ +     +E+ ++DH
Sbjct: 42  VVDKNTAVSEIEDCFKRFIKRDDIDIIVINQNYAE-LIRHVIDSHTAPTPADVEIPSKDH 100

Query: 485 KEESGQYSLV 514
             ++ + S++
Sbjct: 101 PYDASKDSIL 110


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +3

Query: 75  CY*CSRPVFSAGSFYNCSWKAVGXVNGCGK 164
           C+ C+ P+ + G   +C++       GC K
Sbjct: 16  CFSCAEPLEATGCIISCAYCDATFHRGCCK 45


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,846
Number of Sequences: 2352
Number of extensions: 12106
Number of successful extensions: 33
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)