Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_K09
         (682 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   1.8  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   4.0  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    22   5.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.1  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 31  SFGPGVSSSHKLPTFDQXVSPSQNLTKPQPT 123
           S G G+S+S +  T D   SPS N+    P+
Sbjct: 90  SIGGGISASKRQRTDDWLSSPSGNVPPLTPS 120


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 326 FDDLDVGFLGILLRSAGQFVPSVKFGF 246
           FD     FLGIL      F+  ++FGF
Sbjct: 329 FDISRSTFLGILATITTYFIVIIEFGF 355


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 514 KQIHIDFIKLSCSYINERYFQGAK 585
           K++  D +K SC+   ++  QGAK
Sbjct: 63  KRVLPDALKTSCAKCTDKQKQGAK 86


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +3

Query: 240 KGK-AKFDAWHKLAGTSKEDAQKA 308
           +GK AK   W K+AG  +ED + A
Sbjct: 460 RGKNAKDVDWQKIAGAVEEDDEDA 483


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 635 HDFEKDASYFIAL 597
           HD E DASYF  L
Sbjct: 569 HDGEVDASYFCKL 581


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,907
Number of Sequences: 336
Number of extensions: 2824
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)