Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_K09
         (682 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...    94   1e-19
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    72   4e-13
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    53   2e-07
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    50   1e-06
AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical ...    45   6e-05
Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical pr...    42   4e-04
U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a...    40   0.002
U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical pr...    34   0.082
Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical p...    32   0.44 
U58755-1|AAB00691.3|  403|Caenorhabditis elegans Nematode astaci...    28   7.1  

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 93.9 bits (223), Expect = 1e-19
 Identities = 46/82 (56%), Positives = 58/82 (70%)
 Frame = +3

Query: 102 FDQAAANVXXLKALPTYAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAG 281
           FD AAA V  LK  P+  +LL LYA FKQ TVGD +  ++PG+ DLKGKAK+ AW +  G
Sbjct: 5   FDDAAATVKTLKTSPSNDELLKLYALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKG 63

Query: 282 TSKEDAQKAYIEIVEGLIASIG 347
            +K+DAQKAY+ +VE LIA  G
Sbjct: 64  LAKDDAQKAYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 71.7 bits (168), Expect = 4e-13
 Identities = 34/83 (40%), Positives = 53/83 (63%)
 Frame = +3

Query: 90  SKSKFDQAAANVXXLKALPTYAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWH 269
           +++ F++A  N+  LK  P     L LY  FKQAT GD     RPG++D  G+AK+DAW+
Sbjct: 25  AQADFEKAQKNLKTLKEEPDNDVKLQLYGLFKQATAGDVQ-GKRPGMMDFVGRAKYDAWN 83

Query: 270 KLAGTSKEDAQKAYIEIVEGLIA 338
            L G ++++A+  Y ++V GLI+
Sbjct: 84  TLKGQTQDEARANYAKLVGGLIS 106


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
 Frame = +3

Query: 93  KSKFDQAAANVXXLKALPTYA----QLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFD 260
           + KFD A   +  L      A    Q L  Y+ FKQA++GD +  +RPG+  +  + K+D
Sbjct: 4   QEKFDAAVEIIQKLPKTGPVATSNDQKLTFYSLFKQASIGDVN-TDRPGIFSIIERKKWD 62

Query: 261 AWHKLAGTSKEDAQKAYIEIVEGLIASI 344
           +W +L G S+++A++ YI+ +  +   I
Sbjct: 63  SWKELEGVSQDEAKERYIKALNDMFDKI 90


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 27/68 (39%), Positives = 42/68 (61%)
 Frame = +3

Query: 162 LNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIAS 341
           LN YA FKQAT G  D   +P   D++G  K++AW+KL   + ++A++AY++ +   I  
Sbjct: 28  LNFYALFKQATHGKCD-LPKPSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDSIVQKIRE 86

Query: 342 IGLKE*KT 365
           +  KE KT
Sbjct: 87  V-QKEYKT 93


>AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical
           protein Y17G7B.1 protein.
          Length = 115

 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
 Frame = +3

Query: 102 FDQAAANVXXLKALPTYAQLLNLYAHFKQATVGDA--DPANRPGLLDLKGKAKFDAWHKL 275
           F+ AA  +  LK+ PT  + L LYA +KQA  GD   +        D  G+ K+ AW   
Sbjct: 15  FEIAAEEMRRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQ 74

Query: 276 AGTSKEDAQKAYIEIVEGLIASIG 347
            G + E  +  Y+ I E +I   G
Sbjct: 75  KGANSEKCRADYVAIAEEMIKKYG 98


>Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical
           protein T12D8.3 protein.
          Length = 274

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 24/85 (28%), Positives = 38/85 (44%)
 Frame = +3

Query: 87  LSKSKFDQAAANVXXLKALPTYAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAW 266
           L ++KFD A   +           +L  Y  +KQA  G AD    P   +   + KF++W
Sbjct: 27  LLEAKFDAATTRLPGFLTKIDQKTILKFYGLYKQAVEGPADSKKGPYWFETVARKKFNSW 86

Query: 267 HKLAGTSKEDAQKAYIEIVEGLIAS 341
              +  S+  A +AY E++  L  S
Sbjct: 87  LANSQMSRSRAMEAYCELMAQLDTS 111


>U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 4 protein.
          Length = 146

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
 Frame = +3

Query: 87  LSKSKFDQAAANVXXLKALPTYAQL-------LNLYAHFKQATVGDADPANRPGLLDLKG 245
           + KS  +Q  A V  + ALP    +       L +Y+ +KQAT G  D   +P    ++ 
Sbjct: 1   MGKSLDEQFEAAVWIINALPKNGPIKTSINDQLQMYSLYKQATSGKCDTI-QPYFFQIEQ 59

Query: 246 KAKFDAWHKLAGTSKEDAQKAYIE 317
           + K++AW++L    + +A+  Y+E
Sbjct: 60  RMKWNAWNQLGNMDEAEAKAQYVE 83


>U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical
           protein F26A1.15 protein.
          Length = 219

 Score = 34.3 bits (75), Expect = 0.082
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = +3

Query: 237 LKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 332
           + G  K+ AW+K  G +KE+A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188


>Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical
           protein Y41E3.7a protein.
          Length = 435

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +3

Query: 150 YAQLLNLYAHFKQATVGD-ADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVE 326
           Y   + L +  KQ   G+ +D  +  G LD+ G     AW +L   S+++A  +++ +V+
Sbjct: 47  YEDRIKLLSLSKQVQHGEISDEFDNAGWLDITGNDVNKAWRELGSLSRDEAMASFVFLVD 106


>U58755-1|AAB00691.3|  403|Caenorhabditis elegans Nematode astacin
           protease protein 8 protein.
          Length = 403

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 505 FFKKQIHIDFIKLSCSYINERYFQGAKA 588
           FF +QI  +F  LSC Y   +  Q AKA
Sbjct: 355 FFFEQIMKEFCSLSCGYCTPKALQTAKA 382


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,016,290
Number of Sequences: 27780
Number of extensions: 263139
Number of successful extensions: 480
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)