Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_K06
         (798 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   1.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    24   1.6  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    24   1.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    24   1.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           23   2.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.7  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   6.5  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   6.5  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 66  NSNLEVNHGHQQVVYHQVSGAGTYVFVRGS 155
           N N E N+ H   +YH+V     Y   R S
Sbjct: 32  NQNTEQNYTHNNEMYHRVKEEPIYESCRFS 61


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 66  NSNLEVNHGHQQVVYHQVSGAGTYVFVRGS 155
           N N E N+ H   +YH+V     Y   R S
Sbjct: 32  NQNTEQNYTHNNEMYHRVKEEPIYESCRFS 61


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 579 HRNHCYLNISIHIMFCLVIVFF 644
           HR H Y  ++ +++F  V  FF
Sbjct: 24  HRIHSYFMVAFYVVFSSVSTFF 45


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 579 HRNHCYLNISIHIMFCLVIVFF 644
           HR H Y  ++ +++F  V  FF
Sbjct: 24  HRIHSYFMVAFYVVFSSVSTFF 45


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = +3

Query: 576 FHRNHCYLNISIHIMFCLVIVFF 644
           +H    ++  ++H++FC   +FF
Sbjct: 167 YHFFCAFIIFTMHLLFCCAFIFF 189


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +3

Query: 66  NSNLEVNHGHQQVVYHQVSGAGTYVFVRGS 155
           N N E N+ H   +YH V     Y   R S
Sbjct: 32  NQNTEHNYTHNNEMYHSVKEEPIYESCRFS 61


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +1

Query: 103  LSIIKFLELALTCSCVALHYHSYNVDADIGMLVTGTFVGYLI 228
            L I  F+ +  TCS     + +  + A  G+++   FVG ++
Sbjct: 925  LPIAVFILVCATCSSDIQLFFAGLISAIYGLIMMAVFVGVML 966


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +1

Query: 103  LSIIKFLELALTCSCVALHYHSYNVDADIGMLVTGTFVGYLI 228
            L I  F+ +  TCS     + +  + A  G+++   FVG ++
Sbjct: 925  LPIAVFILVCATCSSDIQLFFAGLISAIYGLIMMAVFVGVML 966


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 8/36 (22%)
 Frame = +3

Query: 588 HCYLNISIHI--------MFCLVIVFFFSCEGGKKT 671
           H Y+NI IH+           + I+FF S + G KT
Sbjct: 139 HLYVNILIHLSGLVTIVATLTVTIIFFASYQYGTKT 174


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 8/36 (22%)
 Frame = +3

Query: 588 HCYLNISIHI--------MFCLVIVFFFSCEGGKKT 671
           H Y+NI IH+           + I+FF S + G KT
Sbjct: 139 HLYVNILIHLSGLVTIVATLTVTIIFFASYQYGTKT 174


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,446
Number of Sequences: 336
Number of extensions: 4326
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)