Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_K06
         (798 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10414-10|AAA19077.1|  176|Caenorhabditis elegans Hypothetical p...    29   2.9  
Z82287-3|CAB05313.3|  772|Caenorhabditis elegans Hypothetical pr...    29   3.9  
Z81043-8|CAB02804.2|  550|Caenorhabditis elegans Hypothetical pr...    29   3.9  
U61237-1|AAB17542.1|  550|Caenorhabditis elegans M89 protein.          29   3.9  
AL023813-2|CAA19424.2|  550|Caenorhabditis elegans Hypothetical ...    29   3.9  
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z93380-2|CAB07596.1|  340|Caenorhabditis elegans Hypothetical pr...    28   8.9  
Z68751-7|CAA92977.2|  319|Caenorhabditis elegans Hypothetical pr...    28   8.9  
AC025726-25|AAK73927.2|  409|Caenorhabditis elegans Hypothetical...    28   8.9  

>U10414-10|AAA19077.1|  176|Caenorhabditis elegans Hypothetical
           protein F42A10.6 protein.
          Length = 176

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 122 WSWHLRVRAWLSTTTVTM*MRISACSSPVP 211
           WSW++    W S  T  +   I AC++ VP
Sbjct: 88  WSWNMATCGWSSVPTFGLLNNIDACTNGVP 117


>Z82287-3|CAB05313.3|  772|Caenorhabditis elegans Hypothetical
           protein ZK550.3 protein.
          Length = 772

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 234 EYDEVPDKGTGDEHADIRIYIV 169
           E+ ++ DKG    HAD+RIY V
Sbjct: 451 EFKDITDKGLEKAHADVRIYSV 472


>Z81043-8|CAB02804.2|  550|Caenorhabditis elegans Hypothetical
           protein C29F3.2 protein.
          Length = 550

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 252 LHNADSFTQTDRHLLFAGRC 311
           L N +SFT T++HL+FA  C
Sbjct: 400 LENGESFTLTEKHLVFATDC 419


>U61237-1|AAB17542.1|  550|Caenorhabditis elegans M89 protein.
          Length = 550

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 252 LHNADSFTQTDRHLLFAGRC 311
           L N +SFT T++HL+FA  C
Sbjct: 400 LENGESFTLTEKHLVFATDC 419


>AL023813-2|CAA19424.2|  550|Caenorhabditis elegans Hypothetical
           protein C29F3.2 protein.
          Length = 550

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 252 LHNADSFTQTDRHLLFAGRC 311
           L N +SFT T++HL+FA  C
Sbjct: 400 LENGESFTLTEKHLVFATDC 419


>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
            C33B4.3a protein.
          Length = 1110

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 234  EYDEVPDKGTGDEHADIR 181
            +YD+ PD GTGD   +IR
Sbjct: 1017 DYDDDPDSGTGDSDGEIR 1034


>Z93380-2|CAB07596.1|  340|Caenorhabditis elegans Hypothetical
           protein F28C12.2 protein.
          Length = 340

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
 Frame = +1

Query: 157 HYHSYNVDADIGML--VTGTFVGYLIIFAGAAAGYIMQTPSHKRIDIFYSLV-GVALFVA 327
           H H Y +   + +L  +   F  Y++ +  + AGY+        + ++Y  +  V   V 
Sbjct: 144 HMHQYFIATSLLVLQLLLTMFSFYIVFYGVSLAGYVPMCNFRPELTVYYGAINNVRTGVM 203

Query: 328 SGAIIIDRFQHY 363
              II+  F +Y
Sbjct: 204 VSCIIVTMFVYY 215


>Z68751-7|CAA92977.2|  319|Caenorhabditis elegans Hypothetical
           protein T05E11.6 protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 127 LALTCSCVALHYHSYNVDADIGMLVTGTFVGYLIIF 234
           L+L+ S      +SY+VD DIG+ V   +  Y + F
Sbjct: 213 LSLSSSLTHEESYSYDVDTDIGVYVIDRYTHYTVNF 248


>AC025726-25|AAK73927.2|  409|Caenorhabditis elegans Hypothetical
           protein Y71G12B.26 protein.
          Length = 409

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -2

Query: 428 IAPLMMANEALAKFLSLISLLP*CWN 351
           + P +  ++AL  FL++++LLP  WN
Sbjct: 163 VTPSLEISQALCGFLAILTLLPVIWN 188


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,934,700
Number of Sequences: 27780
Number of extensions: 387926
Number of successful extensions: 970
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)