Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_K02
         (624 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...   176   4e-46
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           88   2e-19
AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.           83   5e-18
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    28   0.21 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   2.0  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   3.4  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score =  176 bits (429), Expect = 4e-46
 Identities = 80/150 (53%), Positives = 103/150 (68%), Gaps = 2/150 (1%)
 Frame = +2

Query: 113 PSRAIAVLS-TETIRGNITFTQVQDGK-VHVQGGITGLPPGEYGFHVHEKGDLSGGCLST 286
           P +AI  L  T  + GN+T +Q    + V +   + GL PG++GFH+HEKGDL+ GC ST
Sbjct: 20  PRKAIVYLQGTSGVSGNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTDGCAST 79

Query: 287 GSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLH 466
           G H+NP+   HG PND  RHVGDLGN+  DEN  ++    D  +SL G   +IGRA+V+H
Sbjct: 80  GGHYNPDKVSHGAPNDQVRHVGDLGNIAADENGIAKTSYSDTVVSLYGARSVIGRAIVIH 139

Query: 467 EKADDYGKSDHPDSRKTGNAGGRVACGVIG 556
            + DD GK++HPDS KTGNAGGRVACGVIG
Sbjct: 140 AEVDDLGKTNHPDSLKTGNAGGRVACGVIG 169


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 87.8 bits (208), Expect = 2e-19
 Identities = 37/87 (42%), Positives = 55/87 (63%)
 Frame = +2

Query: 296 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 475
           +NP+  DHG P+D N HVGDLGN+V      ++I + + +++L G   IIGR + + E  
Sbjct: 1   YNPDGNDHGAPDDANCHVGDLGNIVAYSTGLAKIQIANKKLTLVGDRSIIGRTLSISEYE 60

Query: 476 DDYGKSDHPDSRKTGNAGGRVACGVIG 556
           DD G+  H  S+ TGN+G  +AC +IG
Sbjct: 61  DDLGRGKHDYSKTTGNSGNCIACAIIG 87


>AY745232-1|AAU93511.1|   75|Anopheles gambiae SOD3A protein.
          Length = 75

 Score = 83.4 bits (197), Expect = 5e-18
 Identities = 36/71 (50%), Positives = 50/71 (70%)
 Frame = +2

Query: 344 HVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRKTGN 523
           H GD+GN+V DEN  +++DL   QI+LSG   ++GR++V+H   DD G   H  S+ TG+
Sbjct: 1   HAGDMGNIVADENGEAKVDLTATQIALSGALNVVGRSLVVHADPDDLGVGGHELSKTTGD 60

Query: 524 AGGRVACGVIG 556
           AG R+ACGVIG
Sbjct: 61  AGARLACGVIG 71


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 28.3 bits (60), Expect = 0.21
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
 Frame = +2

Query: 101 GFTTPSRAIAVLSTET-IRGNIT-FTQVQDGKVHVQGGIT---GLPP----GEYGFHVHE 253
           G  TPS   A+ +T+    GN T F Q++     + G  T    +P     G+Y  +  +
Sbjct: 402 GSNTPSNHGALGNTQNNAGGNQTPFGQIKSESNPLGGASTTPTSVPSSNGYGDYMNNCLQ 461

Query: 254 KGDLSGGCLSTGSHFNPEHKDHGHPNDVN 340
            G  SGG  S  SH +P H   G  + VN
Sbjct: 462 SGYFSGGFSSLHSHHSPHHVSPGMGSTVN 490


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 14/52 (26%), Positives = 21/52 (40%)
 Frame = +2

Query: 278 LSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGP 433
           L   +H N       HP  +N +  D+ N++   N  S  +  D    LS P
Sbjct: 405 LEPHAHLNHLRHKSKHPIPINMNADDMNNILAPGNMGSLNESGDSDAHLSHP 456


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 16/59 (27%), Positives = 25/59 (42%)
 Frame = +2

Query: 53  FNSHSWAAIALATAHHGFTTPSRAIAVLSTETIRGNITFTQVQDGKVHVQGGITGLPPG 229
           FNS SW  +A+A A     TP     ++  +  R  +      DG   +    +G+P G
Sbjct: 554 FNSASW--LAIANALQRINTPKYLYDIIG-DYFRNRVLMYDTTDGPAEI-AVTSGVPQG 608


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,551
Number of Sequences: 2352
Number of extensions: 14424
Number of successful extensions: 43
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)