Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_K01
(515 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F6.05 |||oligosaccharyltransferase epsilon subunit |Schizos... 76 4e-15
SPCC1840.03 |sal3|pse1|karyopherin Sal3|Schizosaccharomyces pomb... 29 0.41
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 29 0.55
SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|ch... 27 2.2
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 26 2.9
SPAC13D6.01 |pof14||F-box protein Pof14|Schizosaccharomyces pomb... 26 2.9
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 25 5.1
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 25 5.1
SPCC61.05 |||S. pombe specific multicopy membrane protein family... 25 5.1
SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subun... 25 5.1
SPBC16E9.14c |||membrane transporter|Schizosaccharomyces pombe|c... 25 6.7
SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalyt... 25 8.9
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 8.9
>SPAC6F6.05 |||oligosaccharyltransferase epsilon subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 122
Score = 75.8 bits (178), Expect = 4e-15
Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 7/110 (6%)
Frame = +2
Query: 74 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 253
S L + + Y T LK IDA+L ++ + +QFGY LVGT+PFNSFLSGFIS
Sbjct: 5 SGLFLPLSSVITSYNENTNLSLKTIDAFLGFLVVVGGLQFGYALLVGTYPFNSFLSGFIS 64
Query: 254 TVSCFVLGVCLRLQVNPE------NKNEFQGLSA-ERGFADFIFAHLVLH 382
V FV+ V R+ + + +K + +S +R F +F F+ LVLH
Sbjct: 65 CVGQFVITVGFRMALTQQELQSSSSKKKSPVVSPYKRAFLEFCFSSLVLH 114
>SPCC1840.03 |sal3|pse1|karyopherin Sal3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1095
Score = 29.1 bits (62), Expect = 0.41
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 370 MCKYEICK-ATFGTQPLELILVFWINL*PKTHSKNKAAY 257
+CK IC+ + Q L+ ++ +WIN P TH ++ A Y
Sbjct: 980 ICK--ICRFCSQRVQDLDKVVTYWINTLPVTHDEDDAPY 1016
>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 28.7 bits (61), Expect = 0.55
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 10/72 (13%)
Frame = -3
Query: 309 FSGLTCSRRHTPRTKQLTVDIKP-------LKKELNGKVPTRQ---Q*PNCMTAVRKI*K 160
F G+T RRH K DI P L KE+N Q + P+ ++R +
Sbjct: 36 FEGVTLQRRHVKGMKSYGSDITPRRPKQLGLPKEVNTSECIDQGSWRKPSAFESLRSYSR 95
Query: 159 RYASIILSFLGV 124
+++ I SF+GV
Sbjct: 96 KFSKRIFSFIGV 107
>SPAC30.01c |sec72|sec7b|Sec7 domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1822
Score = 26.6 bits (56), Expect = 2.2
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 60 ITIKCLHLLL*FQNCIKNTQRK-LLRSLK*LMHT 158
+ IKC+ L+ + C+KN + K L+ LK L+ T
Sbjct: 143 VLIKCIEQLIQIKVCMKNEKMKNLMEQLKPLLQT 176
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.2 bits (55), Expect = 2.9
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +2
Query: 95 PKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVG 214
PK+ T L +D YL+YI ++ + Y +G
Sbjct: 557 PKILLSLLYLTDLSLFFLDTYLWYILISTIYSLAYAFCLG 596
>SPAC13D6.01 |pof14||F-box protein Pof14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 431
Score = 26.2 bits (55), Expect = 2.9
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = +2
Query: 59 NHNKMSSLTAVIPK--LYQEYTTKTPKKLKIID 151
N + +LT PK LY Y++++PK KI+D
Sbjct: 139 NLDSSLNLTVASPKSNLYYRYSSESPKYAKILD 171
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 25.4 bits (53), Expect = 5.1
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 217 FPI*FFLKWFYIYSKLL 267
FP FFL WFY++ +L
Sbjct: 293 FPFLFFLFWFYMHFNIL 309
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 25.4 bits (53), Expect = 5.1
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +2
Query: 281 CLRLQVNPENKNEFQGLSAERGFADF 358
C++ QV+P+ NEF +A++ F
Sbjct: 356 CVKFQVDPDKPNEFLAGTADKRILQF 381
>SPCC61.05 |||S. pombe specific multicopy membrane protein family
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 469
Score = 25.4 bits (53), Expect = 5.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 349 KATFGTQPLELILVFWINL*PKTHS 275
K+ G QP ++ L FW+ + THS
Sbjct: 223 KSQSGVQPAQISLAFWVFIFVFTHS 247
>SPBC11B10.01 |alg2|SPBC32H8.14|mannosyltransferase complex subunit
Alg2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 511
Score = 25.4 bits (53), Expect = 5.1
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
Frame = +2
Query: 158 LFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSC----FVLGVCL 286
L +F+ ++ +G C + T PF F T S F+LG C+
Sbjct: 448 LLAVFVLFMLFWGTCIIAATVPFAIIKLYFAQTYSSVKLGFMLGTCI 494
>SPBC16E9.14c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 386
Score = 25.0 bits (52), Expect = 6.7
Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 92 IPKLYQEYTTKT-PKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVS 262
IP + + T P+KLK+ + LF++ V+ G ++ T + + G + ++
Sbjct: 80 IPTFKETFAILTFPQKLKLTSSILFFLVAVGVLLSGDATILLTLSCSLIVEGVLIIIN 137
>SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalytic
subunit Pka1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 24.6 bits (51), Expect = 8.9
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 59 NHNKMSSLTAVIPKLYQEYT-TKTPKKL 139
NHN+ S T+ IPK +E T +K P L
Sbjct: 72 NHNESSLWTSGIPKALEEATKSKKPDSL 99
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +2
Query: 74 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGT 217
+SL + PK T L +D YL+Y+ ++ + Y +G+
Sbjct: 641 ASLCSHQPKFLLSLVYLTDLVLFFLDTYLWYMLISTMFSIAYSFYMGS 688
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,821,554
Number of Sequences: 5004
Number of extensions: 35934
Number of successful extensions: 114
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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