Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_J24
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.3  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   4.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   5.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.8  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +1

Query: 337 TPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTF 468
           T  VVE S     TP  +    +G  +  +P  RQ + N    F
Sbjct: 39  TGAVVECSAHGNPTPDIIWVRSDGTAVGDVPGLRQVLANGNLVF 82


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 407  PSFEKATWEGVVREPSLFSTTLGVLPSMTATHEFVVPRS 291
            PS E    E     PS+ S+T+   P  + T   V P+S
Sbjct: 1783 PSVEAVEEEREEAPPSVHSSTVVPPPQHSTTQSLVDPKS 1821


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 419 SECPPNGKRSRIAVT 463
           + CP  GKRS+ A++
Sbjct: 24  TNCPRGGKRSKFAIS 38


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 663 VXFSSFLHFYQHKCTNXARRVYFAIS 586
           + F  F  FY HK T     VY+ IS
Sbjct: 300 IIFQVFESFYLHKATT-LETVYYFIS 324


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 491 PINLFVA*NVLPLFVTA 441
           P+N  ++ N+LPL+ +A
Sbjct: 43  PVNDIISGNILPLYTSA 59


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,437
Number of Sequences: 336
Number of extensions: 4037
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)