Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_J24
(722 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 225 4e-60
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 146 3e-36
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 145 5e-36
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 144 1e-35
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 143 2e-35
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 77 3e-15
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 56 5e-09
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 40 4e-04
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 32 0.095
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 29 0.89
SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4 |Schizosac... 27 2.1
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 27 2.1
SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 27 2.7
SPAC3G9.15c |fcf2||rRNA processing protein Fcf2 |Schizosaccharom... 27 3.6
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 27 3.6
SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin Nup132|Schizosa... 26 4.7
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 25 8.3
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 225 bits (551), Expect = 4e-60
Identities = 105/154 (68%), Positives = 127/154 (82%)
Frame = +1
Query: 259 SEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKR 438
+E V+G VIGIDLGTT SC+A+MEG+TPKV+ N+EG+RTTPS VAF+K+GERLVG+ AKR
Sbjct: 45 NEKVKGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKR 104
Query: 439 QAVTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGTDGKVYSPSXI 618
QAV N NTF+ATKRLIGRRF +PEVQ+D+K + YK+V SNGDAW++ GK YSPS I
Sbjct: 105 QAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNGDAWLEAR-GKTYSPSQI 163
Query: 619 GAFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
G F+L KM+ETA YL VKNAV+TVP YFNDS
Sbjct: 164 GGFILSKMRETASTYLGKDVKNAVVTVPAYFNDS 197
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 146 bits (354), Expect = 3e-36
Identities = 75/149 (50%), Positives = 100/149 (67%), Gaps = 3/149 (2%)
Frame = +1
Query: 283 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 462
IGIDLGTT SCV +++ N +G+RTTPS+VAF+ + ERL+G AK Q N N
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 63
Query: 463 TFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQ---GTDGKVYSPSXIGAFVL 633
T + KRLIGR+FDDPEVQ DMK+ +KV+ + +G +Q + K ++P I + VL
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVI-SKDGKPVLQVEYKGETKTFTPEEISSMVL 122
Query: 634 IKMKETAEXYLNTSVKNAVITVPXYFNDS 720
+KM+ETAE YL V +AV+TVP YFNDS
Sbjct: 123 MKMRETAEAYLGGKVTDAVVTVPAYFNDS 151
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 145 bits (352), Expect = 5e-36
Identities = 75/151 (49%), Positives = 99/151 (65%), Gaps = 2/151 (1%)
Frame = +1
Query: 274 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 453
G VIGIDLGTT SCVAVM+ +++ N +G+R TPS+VAF+ E ERLVG AK QA +N
Sbjct: 35 GTVIGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFT-EDERLVGEAAKNQAPSN 93
Query: 454 SGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGTDG--KVYSPSXIGAF 627
NT + KRLIGR+FD+ + KD+K+ + +V N G K ++P I A
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 628 VLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
+L KMK+TAE YL V +AV+TVP YFND+
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPAYFNDA 184
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 144 bits (349), Expect = 1e-35
Identities = 82/157 (52%), Positives = 104/157 (66%), Gaps = 3/157 (1%)
Frame = +1
Query: 259 SEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKR 438
SE GA IGIDLGTT SCVAV E +++ N +G+RTTPS VAF+ E ERLVG AK
Sbjct: 2 SEVYEGA-IGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFT-ETERLVGDAAKN 59
Query: 439 QAVTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGT---DGKVYSP 609
QA N NT + KRLIGRR++DPE QKD+K+ +KV+ +NG ++ + K ++
Sbjct: 60 QAAMNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVI-DNNGIPTIEVNYLGEKKQFTA 118
Query: 610 SXIGAFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
I A VL KMKE +E LN V+ AVITVP YF+DS
Sbjct: 119 QEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDS 155
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 143 bits (347), Expect = 2e-35
Identities = 73/149 (48%), Positives = 99/149 (66%), Gaps = 3/149 (2%)
Frame = +1
Query: 283 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 462
IGIDLGTT SCV +++ N +G+RTTPS+VAF+ + ERL+G AK Q N N
Sbjct: 5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPHN 63
Query: 463 TFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQ---GTDGKVYSPSXIGAFVL 633
T + KRLIGRRF+DPEVQ DMK+ +KV+ +G +Q + K ++P I + VL
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIE-KDGKPLIQVEFKGETKTFTPEEISSMVL 122
Query: 634 IKMKETAEXYLNTSVKNAVITVPXYFNDS 720
+KM+E+AE +L V +AV+TVP YFNDS
Sbjct: 123 LKMRESAEAFLGGKVTDAVVTVPAYFNDS 151
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 77.0 bits (181), Expect = 3e-15
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 4/153 (2%)
Frame = +1
Query: 271 RGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVT 450
R V+GID G + + +AV + V+ N +R+TPS V++ E R +G AK +
Sbjct: 4 RTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYG-ERSRFLGEAAKSAEAS 62
Query: 451 NSGNTFYATKRLIGRRFDDPEVQKDMKN--LSYKVVRASN-GDAWVQG-TDGKVYSPSXI 618
N NT + KRL GR +DDPE+ KD+++ +S K+ A VQ + +S +
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEI-KDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQL 121
Query: 619 GAFVLIKMKETAEXYLNTSVKNAVITVPXYFND 717
A K+K AE L SV + VI++P +F D
Sbjct: 122 IAAYFTKIKAIAEAELIGSVSDVVISIPAWFTD 154
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 56.0 bits (129), Expect = 5e-09
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Frame = +1
Query: 280 VIGIDLGTTNSCVAV-MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 456
VIGI G NS +A +GKT V+ N EG+R PS +++ + E G+ A+ Q V N+
Sbjct: 26 VIGISFGNQNSSIAFNRDGKT-DVLANEEGNRQIPSILSYHGDQE-YHGVQARGQLVRNA 83
Query: 457 GNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNG-DAWVQGTD-----GKVYSPSXI 618
N+ + L+G+ D+ + + + V G VQ + K+ +
Sbjct: 84 DNSVTNFRDLLGKSHDELTLHHCHYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEA 143
Query: 619 GAFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
L ++ E+AE +L T V V++VP YF D+
Sbjct: 144 SVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDA 177
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 39.9 bits (89), Expect = 4e-04
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 7/154 (4%)
Frame = +1
Query: 277 AVIGIDLGTTNSCVAVMEGKTP-KVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 453
+V+ ID GT + A+++ P ++V + R S VAF K ER+ G+ A A
Sbjct: 23 SVLAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAF-KGNERIFGVDASNLATRF 81
Query: 454 SGNTFYATKRLIGRR-FDDPEVQKDMKNLSYKVVRASNGDAWVQG-----TDGKVYSPSX 615
++ K L+ + VQK SY ++ + G +D + YS
Sbjct: 82 PAHSIRNVKELLDTAGLESVLVQKYQS--SYPAIQLVENEETTSGISFVISDEENYSLEE 139
Query: 616 IGAFVLIKMKETAEXYLNTSVKNAVITVPXYFND 717
I A + AE + + + V+TVP +FN+
Sbjct: 140 IIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNE 173
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 31.9 bits (69), Expect = 0.095
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = -1
Query: 641 IFINTNAPXWLGEYTLPSVPCTQASPFEALTTLYDKFFMSFCT-SGSSNRRPINLFVA*N 465
IF +T Y P T + LT L D F SG+ NRRPI+ V N
Sbjct: 479 IFPSTTLSSTASGYYTPDSLSTPEPSIDGLTNLDDVQVGGFVQGSGNQNRRPISFPVISN 538
Query: 464 VLPLFVTACRLAGIPTRRSP 405
+ P +T R A P SP
Sbjct: 539 MQP-NITNVRSASAPLCSSP 557
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 28.7 bits (61), Expect = 0.89
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -1
Query: 371 REPSLFSTTLGVLPSMTATHEFVVPRSIPMTAPRTPSDLFLNCTPCRW*IGTV 213
+EP S T PS + P+ PRT D+ +PC+ +GT+
Sbjct: 548 KEPEESSITPTTPPSFNVGESLSRRSASPLQHPRTSPDMLDKTSPCKRGLGTI 600
>SPAC31A2.09c |apm4||AP-2 adaptor complex subunit Apm4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 446
Score = 27.5 bits (58), Expect = 2.1
Identities = 9/35 (25%), Positives = 23/35 (65%)
Frame = -3
Query: 546 FV*QILHVLLHFGIVESTSDQSLRRVKRVTAIRDR 442
F+ ++L ++ +GI+++T +L R +TA++ +
Sbjct: 106 FIFELLDEMIDYGIIQTTEPDALARSVSITAVKKK 140
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -3
Query: 681 FHTCVQVXFSSFLHFYQHKCTNXARRVYFAISTL 580
F+ V F SF Y KCT A V +AIS L
Sbjct: 387 FYGLDDVIFHSFTRTYGFKCTLSASDVSYAISAL 420
>SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit
Mcm5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 27.1 bits (57), Expect = 2.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 342 GCLALHDGNARVCRAQIDSNDGSTNT 265
G +A+ + RV Q+DSNDGS +T
Sbjct: 277 GAVAIRNPYIRVVGIQMDSNDGSKST 302
>SPAC3G9.15c |fcf2||rRNA processing protein Fcf2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 230
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 148 GLSSDLYTQRNFSSILKSNATPTVPIYQRH 237
GL D + + S I ++ PTVPIY+ H
Sbjct: 65 GLKKDELVENSESYINDASFEPTVPIYESH 94
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = -2
Query: 193 KLTKNFSAYTSLNLIRCTLKPFGRMPASRSTSLSRIKILY 74
KL K+F +T LNL++C + M ++++ ++ LY
Sbjct: 603 KLNKDFDDFTPLNLLKCV--NYSLMEFQKNSTFDMLEKLY 640
>SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin
Nup132|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1162
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -1
Query: 641 IFINTNAPXWLGEYTLPSVPCTQASPFEALTTL 543
IF++T LG+Y++P+ C A+P+ + +
Sbjct: 411 IFMSTCYKYVLGKYSIPTESCFIATPYSGIAEI 443
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 25.4 bits (53), Expect = 8.3
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -3
Query: 702 WHCYDCIFHTCVQVXFSSFLHFYQHKCTNXA-RRVYFAISTLHPGVAIRS 556
W C +F++C V SS+ F K + + R++ I P IR+
Sbjct: 214 WLCDSFVFYSCCIVFISSYSIFLSVKESKESENRIHSIIGAPQPVTVIRN 263
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,107,390
Number of Sequences: 5004
Number of extensions: 67260
Number of successful extensions: 186
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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