Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_J24
(722 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090... 238 4e-63
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74... 236 1e-62
05_04_0392 - 20889699-20891726 156 2e-38
08_01_0654 - 5639419-5641449 152 2e-37
05_04_0052 - 17515344-17517353 152 3e-37
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 152 3e-37
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 150 1e-36
12_01_0850 + 7985289-7985789,7986636-7986888,7987173-7987231 150 1e-36
03_02_0546 - 9381989-9383733,9385838-9386054 147 7e-36
05_05_0109 - 22454539-22456268,22457069-22457279 146 2e-35
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 145 3e-35
03_02_0540 + 9340379-9340592,9341250-9342988 142 3e-34
03_06_0484 + 34233042-34233258,34235317-34237049 140 8e-34
11_08_0075 + 28173220-28173433,28175348-28177083 140 1e-33
03_02_0542 - 9348126-9349585,9352433-9352655 129 2e-30
11_01_0564 - 4447078-4448519,4449465-4449711 128 3e-30
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 128 3e-30
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 124 9e-29
11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,443... 122 2e-28
01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819 122 4e-28
01_01_0573 + 4253484-4254653,4255526-4255735,4255842-4255937,425... 92 4e-19
05_01_0550 + 4820086-4821255,4822112-4822321,4822429-4822524,482... 88 6e-18
12_01_0346 + 2652181-2653566 78 6e-15
12_02_0825 + 23476943-23476952,23477263-23477328,23477737-234778... 69 5e-12
11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836 64 1e-10
02_05_0491 + 29470575-29471351,29471574-29471806,29472697-294728... 60 2e-09
05_07_0320 + 29235266-29235305,29235409-29236682 60 2e-09
03_02_0180 - 6211823-6213559 58 5e-09
06_03_1137 + 27903012-27904196,27904330-27904542,27905775-279058... 50 2e-06
06_01_0770 - 5756200-5756741,5756790-5757286,5757356-5757782,575... 46 3e-05
01_01_0770 - 5968042-5968281,5968799-5969156,5970975-5971384 32 0.53
01_06_1114 + 34619597-34619972,34620772-34620852,34621294-346213... 30 1.6
08_01_0761 - 7296069-7296169,7296516-7296703,7297016-7297026,729... 29 4.9
01_01_0718 - 5578959-5580761,5583683-5584160,5584239-5584267 29 4.9
11_04_0460 - 17955102-17955146,17955253-17955310,17955442-179555... 28 6.5
04_03_0057 + 10407402-10407452,10407540-10407782,10408506-104089... 28 6.5
05_02_0119 + 6793292-6793613,6795793-6795952,6796416-6796458,679... 28 8.6
>02_05_0916 -
32706039-32706332,32707483-32708103,32708450-32709070,
32709183-32709752,32709840-32709918,32710002-32710075,
32711336-32711398
Length = 773
Score = 238 bits (582), Expect = 4e-63
Identities = 111/147 (75%), Positives = 127/147 (86%)
Frame = +1
Query: 280 VIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 459
VIGIDLGTTNSCV+VMEGK PKV+ENSEG+RTTPS VAF+++GERLVG PAKRQAVTN
Sbjct: 54 VIGIDLGTTNSCVSVMEGKNPKVIENSEGTRTTPSVVAFNQKGERLVGTPAKRQAVTNPQ 113
Query: 460 NTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGTDGKVYSPSXIGAFVLIK 639
NTF+ TKRLIGRRF+DP+ QK+MK + YK+V+A NGDAWV+ TDGK YSPS IGAFVL K
Sbjct: 114 NTFFGTKRLIGRRFEDPQTQKEMKMVPYKIVKAPNGDAWVETTDGKQYSPSQIGAFVLTK 173
Query: 640 MKETAEXYLNTSVKNAVITVPXYFNDS 720
MKETAE YL +V AVITVP YFND+
Sbjct: 174 MKETAESYLGKTVSKAVITVPAYFNDA 200
>03_01_0093 -
745434-746057,746492-747112,747222-747791,747870-747948,
748258-748331,748385-748387
Length = 656
Score = 236 bits (578), Expect = 1e-62
Identities = 111/147 (75%), Positives = 126/147 (85%)
Frame = +1
Query: 280 VIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 459
VIGIDLGTTNSCV+VMEGK PKV+ENSEG+RTTPS VAF+++GE LVG PAKRQAVTN
Sbjct: 34 VIGIDLGTTNSCVSVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNPQ 93
Query: 460 NTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGTDGKVYSPSXIGAFVLIK 639
NTF+ TKRLIGRRFDDP+ QK+MK + YK+V+A NGDAW++ TDGK YSPS IGAFVL K
Sbjct: 94 NTFFGTKRLIGRRFDDPQTQKEMKMVPYKIVKALNGDAWLETTDGKQYSPSQIGAFVLTK 153
Query: 640 MKETAEXYLNTSVKNAVITVPXYFNDS 720
MKETAE YL SV AVITVP YFND+
Sbjct: 154 MKETAESYLGKSVSKAVITVPAYFNDA 180
>05_04_0392 - 20889699-20891726
Length = 675
Score = 156 bits (378), Expect = 2e-38
Identities = 83/158 (52%), Positives = 100/158 (63%), Gaps = 3/158 (1%)
Frame = +1
Query: 256 KSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAK 435
KS G G VIGIDLGTT SCV V +++ N +G+R TPS VAF+ GERL+G AK
Sbjct: 38 KSGGGGGTVIGIDLGTTYSCVGVYRNDRVEIIANDQGNRITPSWVAFTDGGERLIGEAAK 97
Query: 436 RQAVTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVV-RASNGDAWVQGTDG--KVYS 606
QA N T Y KRLIGR+F D EVQ+DMK L + VV R V+ DG +V+S
Sbjct: 98 NQAAANPERTIYDAKRLIGRQFSDAEVQRDMKLLPFAVVDRNGKPHVRVEVKDGDVRVFS 157
Query: 607 PSXIGAFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
P + A VL +MKETAE YL V AV+TVP YFND+
Sbjct: 158 PEEVSAMVLTRMKETAEAYLGEKVTRAVVTVPAYFNDA 195
>08_01_0654 - 5639419-5641449
Length = 676
Score = 152 bits (369), Expect = 2e-37
Identities = 81/155 (52%), Positives = 98/155 (63%), Gaps = 3/155 (1%)
Frame = +1
Query: 265 GVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQA 444
G G VIGIDLGTT SCV V +++ N +G+R TPS VAF+ GERL+G AK QA
Sbjct: 41 GGGGTVIGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTDGGERLIGEAAKNQA 100
Query: 445 VTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVV-RASNGDAWVQGTDG--KVYSPSX 615
N T Y KRLIGR+F D EVQ+DMK L + VV R V+ DG +V+SP
Sbjct: 101 AANPERTIYDAKRLIGRQFSDAEVQRDMKLLPFAVVDRNGKPHVRVEVKDGDVRVFSPEE 160
Query: 616 IGAFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
+ A VL +MKETAE YL V AV+TVP YFND+
Sbjct: 161 VSAMVLTRMKETAEAYLGEKVTRAVVTVPAYFNDA 195
>05_04_0052 - 17515344-17517353
Length = 669
Score = 152 bits (368), Expect = 3e-37
Identities = 80/155 (51%), Positives = 97/155 (62%), Gaps = 3/155 (1%)
Frame = +1
Query: 265 GVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQA 444
G G VIGIDLGTT SCV V +++ N +G+R TPS VAF+ GERL+G AK QA
Sbjct: 36 GGGGTVIGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTGGGERLIGEAAKNQA 95
Query: 445 VTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGD---AWVQGTDGKVYSPSX 615
N G T Y KRLIGRRF D EVQ+DM+ L + VV V+G D ++ SP
Sbjct: 96 AANPGRTVYDAKRLIGRRFADAEVQRDMRLLPFAVVDKGGKPHVRVEVRGGDVRLLSPEE 155
Query: 616 IGAFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
+ A VL +MKETAE YL V AV+TVP YFND+
Sbjct: 156 VSAMVLARMKETAEAYLGEEVTRAVVTVPAYFNDA 190
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 152 bits (368), Expect = 3e-37
Identities = 82/153 (53%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Frame = +1
Query: 271 RGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVT 450
+G VIGIDLGTT SCV V +V N +G+R TPS VAF+ + ERLVG AK QA
Sbjct: 36 KGPVIGIDLGTTYSCVGVYRNGHVDIVANDQGNRITPSWVAFTDD-ERLVGEAAKNQAAL 94
Query: 451 NSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNG---DAWVQGTDGKVYSPSXIG 621
N T + KRLIGRRFDD EVQ+D+K L YKVV + V+ + KV+SP I
Sbjct: 95 NPDRTIFDIKRLIGRRFDDEEVQRDVKYLPYKVVDKGGKPYVEVRVKAGEVKVFSPEEIS 154
Query: 622 AFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
A +L KMKETAE YL V +AV+TVP YFND+
Sbjct: 155 AMILAKMKETAESYLGQRVTDAVVTVPAYFNDA 187
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 150 bits (364), Expect = 1e-36
Identities = 76/153 (49%), Positives = 102/153 (66%), Gaps = 4/153 (2%)
Frame = +1
Query: 274 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 453
G VIGIDLGTT SCV V + +++ N +G+R TPS VAF+ + ERL+G AK QA N
Sbjct: 33 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVN 91
Query: 454 SGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQ----GTDGKVYSPSXIG 621
T + KRLIGR+F+D EVQ+DMK + YK+V +G ++Q + KV+SP +
Sbjct: 92 PERTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVN-KDGKPYIQVKIKDGENKVFSPEEVS 150
Query: 622 AFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
A +L KMKETAE YL + +AV+TVP YFND+
Sbjct: 151 AMILGKMKETAEAYLGKKINDAVVTVPAYFNDA 183
>12_01_0850 + 7985289-7985789,7986636-7986888,7987173-7987231
Length = 270
Score = 150 bits (363), Expect = 1e-36
Identities = 79/148 (53%), Positives = 98/148 (66%), Gaps = 1/148 (0%)
Frame = +1
Query: 280 VIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 459
V+GIDLGTTNS VA MEG P V+ N+EG RTTPS VA++K GERLVG AKRQAV N
Sbjct: 53 VVGIDLGTTNSAVAAMEGGKPTVITNAEGQRTTPSVVAYTKGGERLVGQIAKRQAVVNPE 112
Query: 460 NTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQ-GTDGKVYSPSXIGAFVLI 636
NTF++ KR IGR+ EV + K +SY VVR NG+ + GK ++ I A VL
Sbjct: 113 NTFFSVKRFIGRKM--AEVDDEAKQVSYHVVRDDNGNVKLDCPAIGKQFAAEEISAQVLR 170
Query: 637 KMKETAEXYLNTSVKNAVITVPXYFNDS 720
K+ + A +LN + AV+TVP YFNDS
Sbjct: 171 KLVDDASKFLNDKITKAVVTVPAYFNDS 198
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 147 bits (357), Expect = 7e-36
Identities = 81/159 (50%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
Frame = +1
Query: 253 NKSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPA 432
NK EG IGIDLGTT SCV V + +++ N +G+RTTPS+VAF+ + ERL+G A
Sbjct: 4 NKGEG---PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAA 59
Query: 433 KRQAVTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGT---DGKVY 603
K Q N NT + KRLIGRRF DP VQ DMK +KVV + T + K +
Sbjct: 60 KNQVAMNPTNTVFDAKRLIGRRFSDPSVQADMKMWPFKVVPGPADKPMIVVTYKGEEKKF 119
Query: 604 SPSXIGAFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
S I + VL KMKE AE +L+T++KNAVITVP YFNDS
Sbjct: 120 SAEEISSMVLTKMKEIAEAFLSTTIKNAVITVPAYFNDS 158
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 146 bits (353), Expect = 2e-35
Identities = 76/152 (50%), Positives = 97/152 (63%), Gaps = 3/152 (1%)
Frame = +1
Query: 274 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 453
G IGIDLGTT SCV V + +++ N +G+RTTPS+VAF+ + ERL+G AK Q N
Sbjct: 6 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMN 64
Query: 454 SGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWV---QGTDGKVYSPSXIGA 624
NT + KRLIGRRF DP VQ DMK +KVV + + K ++ I +
Sbjct: 65 PTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVVPGPGDKPMIVVQYKGEEKQFAAEEISS 124
Query: 625 FVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
VLIKM+E AE YL +S+KNAV+TVP YFNDS
Sbjct: 125 MVLIKMREIAEAYLGSSIKNAVVTVPAYFNDS 156
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 145 bits (352), Expect = 3e-35
Identities = 75/152 (49%), Positives = 97/152 (63%), Gaps = 3/152 (1%)
Frame = +1
Query: 274 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 453
G IGIDLGTT SCV V + +++ N +G+RTTPS+VAF+ + ERL+G AK Q N
Sbjct: 199 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMN 257
Query: 454 SGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWV---QGTDGKVYSPSXIGA 624
NT + KRLIGRRF DP VQ DMK +KV+ + + K +S I +
Sbjct: 258 PINTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPGDKPMIVVQYKGEEKQFSAEEISS 317
Query: 625 FVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
VLIKM+E AE YL +++KNAV+TVP YFNDS
Sbjct: 318 MVLIKMREIAEAYLGSNIKNAVVTVPAYFNDS 349
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 142 bits (343), Expect = 3e-34
Identities = 78/153 (50%), Positives = 98/153 (64%), Gaps = 4/153 (2%)
Frame = +1
Query: 274 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 453
G IGIDLGTT SCV V + +++ N +G+RTTPS+VAF+ + ERL+G AK Q N
Sbjct: 7 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMN 65
Query: 454 SGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGT----DGKVYSPSXIG 621
NT + KRLIGRRF D VQ D K +KV+ GD + G + K +S I
Sbjct: 66 PINTVFDAKRLIGRRFSDTSVQSDAKLWPFKVLPGP-GDKPMIGVQYKGEEKQFSAEEIS 124
Query: 622 AFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
+ VL KMKETAE YL ++VKNAV+TVP YFNDS
Sbjct: 125 SMVLNKMKETAEAYLGSTVKNAVVTVPAYFNDS 157
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 140 bits (340), Expect = 8e-34
Identities = 75/153 (49%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Frame = +1
Query: 274 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 453
G IGIDLGTT SCV V + +++ N +G+RTTPS+V F+ + ERL+G AK Q N
Sbjct: 8 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DTERLIGDAAKNQVAMN 66
Query: 454 SGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWV----QGTDGKVYSPSXIG 621
NT + KRLIGRRF D VQ D+K YKV+ + +G + K +S I
Sbjct: 67 PINTVFDAKRLIGRRFSDASVQSDIKMWPYKVIPGPGDKPMIVVQYKGEE-KQFSAEEIS 125
Query: 622 AFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
+ VLIKM+E AE YL ++VKNAV+TVP YFNDS
Sbjct: 126 SMVLIKMREIAEAYLGSTVKNAVVTVPAYFNDS 158
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 140 bits (339), Expect = 1e-33
Identities = 77/153 (50%), Positives = 99/153 (64%), Gaps = 4/153 (2%)
Frame = +1
Query: 274 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 453
G IGIDLGTT SCV V + +++ N +G+RTTPS+V F+ + ERL+G AK Q N
Sbjct: 7 GPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFT-DSERLIGDAAKNQVAMN 65
Query: 454 SGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDA---WVQGT-DGKVYSPSXIG 621
NT + KRLIGRRF D VQ D+K +KV+ A GD VQ + K ++ I
Sbjct: 66 PINTVFDAKRLIGRRFSDASVQSDIKLWPFKVI-AGPGDKPMIVVQYKGEEKQFAAEEIS 124
Query: 622 AFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
+ VLIKM+E AE YL T++KNAV+TVP YFNDS
Sbjct: 125 SMVLIKMREIAEAYLGTTIKNAVVTVPAYFNDS 157
>03_02_0542 - 9348126-9349585,9352433-9352655
Length = 560
Score = 129 bits (312), Expect = 2e-30
Identities = 75/153 (49%), Positives = 94/153 (61%), Gaps = 4/153 (2%)
Frame = +1
Query: 274 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 453
G +GIDLGTT SCVAV +V+ N +G+ TTPS VAF+ + RL+G A QA N
Sbjct: 10 GPAVGIDLGTTYSCVAVWRRGRVEVIPNDQGNLTTPSCVAFT-DTWRLIGDAALNQAAMN 68
Query: 454 SGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWV----QGTDGKVYSPSXIG 621
NT + KRLIGRRF D VQ D+K +KV + + +G + K +S I
Sbjct: 69 PLNTIFDAKRLIGRRFSDVSVQGDIKLWPFKVTSGKDDRPMIVVQYRGEE-KEFSAEEIS 127
Query: 622 AFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
A VL KMKETAE YL+ +V+ AVITVP YFNDS
Sbjct: 128 AMVLFKMKETAEAYLDKTVEKAVITVPVYFNDS 160
>11_01_0564 - 4447078-4448519,4449465-4449711
Length = 562
Score = 128 bits (310), Expect = 3e-30
Identities = 72/157 (45%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
Frame = +1
Query: 265 GVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGE-RLVGMPAKRQ 441
G G +GIDLGTT SCVAV +V+ N +G+R TPS VAF+ + + VG A Q
Sbjct: 13 GGGGPAVGIDLGTTYSCVAVWRHDRGEVIANDQGNRLTPSCVAFTADDDDSFVGDAAFNQ 72
Query: 442 AVTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWV----QGTDGKVYSP 609
+ N NT + KRLIGRRF D VQKD+K +KVV + +G + + + P
Sbjct: 73 SALNPTNTIFEVKRLIGRRFSDDSVQKDIKLWPFKVVAGQEDRPMIVVRHEGEE-RQFMP 131
Query: 610 SXIGAFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
I + VL KM+ETAE YL +V NAVITVP YFN++
Sbjct: 132 EEISSMVLAKMRETAEVYLGKTVTNAVITVPVYFNNA 168
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 128 bits (310), Expect = 3e-30
Identities = 67/133 (50%), Positives = 89/133 (66%), Gaps = 1/133 (0%)
Frame = +1
Query: 325 MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTFYATKRLIGRRFD 504
MEG P +V N+EG+RTTPS VA++K G+RLVG AKRQAV N NTF++ KR IGR+ +
Sbjct: 1 MEGGKPTIVTNAEGARTTPSVVAYTKSGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMN 60
Query: 505 DPEVQKDMKNLSYKVVRASNGDAWVQ-GTDGKVYSPSXIGAFVLIKMKETAEXYLNTSVK 681
EV ++ K +SY+V+R NG+ + GK ++ I A VL K+ + A +LN V
Sbjct: 61 --EVDEESKQVSYRVIRDDNGNVKLDCPAIGKQFAAEEISAQVLRKLVDDASKFLNDKVT 118
Query: 682 NAVITVPXYFNDS 720
AVITVP YFNDS
Sbjct: 119 KAVITVPAYFNDS 131
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 124 bits (298), Expect = 9e-29
Identities = 70/152 (46%), Positives = 93/152 (61%), Gaps = 4/152 (2%)
Frame = +1
Query: 277 AVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERL-VGMPAKRQAVTN 453
AV+GID+G T SCVAV +++ N +GSR TPS VAF+ G RL VG AK QAV +
Sbjct: 35 AVLGIDIGATYSCVAVYCKGRVEIIPNDQGSRLTPSWVAFTDGGGRLVVGEAAKEQAVGS 94
Query: 454 SGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVV-RASNGDAWVQGTDG--KVYSPSXIGA 624
G + RL+G++ D +VQ++M L Y VV V+ DG +V SP I A
Sbjct: 95 PGRAVHDFMRLLGKKLGDDDVQREMTRLPYAVVDMEGKPHVLVEAADGDVRVLSPEEIAA 154
Query: 625 FVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
VL KMK+TAE +L +V +AV+ VP YFND+
Sbjct: 155 AVLAKMKKTAEAHLGRTVSSAVVAVPVYFNDA 186
>11_01_0563 +
4423609-4423846,4424671-4426132,4428949-4429364,
4430555-4432052,4432199-4432217,4432469-4432675,
4432814-4433065
Length = 1363
Score = 122 bits (295), Expect = 2e-28
Identities = 70/159 (44%), Positives = 93/159 (58%), Gaps = 4/159 (2%)
Frame = +1
Query: 256 KSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAK 435
K G G IGIDLGTT SCVAV + + N +G+R TPS VAF+ +R VG A+
Sbjct: 9 KGGGGGGPAIGIDLGTTYSCVAVRRRYRSEAITNDQGNRITPSCVAFTA-ADRFVGDAAE 67
Query: 436 RQAVTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWV----QGTDGKVY 603
QA N NT + KRLIGRRF D VQ+D+K +KV+ + + +G + K +
Sbjct: 68 NQAALNPTNTIFEVKRLIGRRFSDKSVQEDIKLWPFKVIAGRDDRPTIVVRHEGKE-KQF 126
Query: 604 SPSXIGAFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
P I A VL K+++ A YL V +AVITVP YFN++
Sbjct: 127 VPEEISAMVLSKLRDAAVAYLGEPVTDAVITVPVYFNNA 165
Score = 120 bits (290), Expect = 9e-28
Identities = 70/155 (45%), Positives = 91/155 (58%), Gaps = 3/155 (1%)
Frame = +1
Query: 265 GVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQA 444
G G IGIDLGTT SC AV +V+ N +G+R TPS VAF+ + +R VG A+ QA
Sbjct: 638 GGGGPAIGIDLGTTYSCAAVRRHNRSEVITNDQGNRITPSCVAFTAD-DRFVGDAAENQA 696
Query: 445 VTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRA-SNGDAWVQGTDGK--VYSPSX 615
N NT + KRLIGRRF VQ+D+K +KVV + V +GK + P
Sbjct: 697 ALNPTNTIFEAKRLIGRRFSSKSVQEDIKLWPFKVVAGPDDRPTIVVQHEGKEMQFVPEE 756
Query: 616 IGAFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
I A VL K+++ A YL V +AVITVP YFN++
Sbjct: 757 ISAMVLSKLRDAAVAYLGEPVTDAVITVPVYFNNA 791
>01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819
Length = 539
Score = 122 bits (293), Expect = 4e-28
Identities = 69/150 (46%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Frame = +1
Query: 274 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 453
G VIGIDLGT SCVAV + ++V N G R TPS+ AF+ + ERLVG AK QA N
Sbjct: 9 GPVIGIDLGTACSCVAVWQNGRAEIVTNEHGGRATPSYAAFT-DTERLVGDAAKSQASRN 67
Query: 454 SGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGT---DGKVYSPSXIGA 624
NT +ATKRL+GRRF D VQ +K +KVV V + K+ + + +
Sbjct: 68 PTNTVFATKRLMGRRFSDASVQDGLKLWPFKVVPGRGDKPMVAASYKGKQKLLAAEEVAS 127
Query: 625 FVLIKMKETAEXYLNTSVKNAVITVPXYFN 714
+L KMK AE Y+ VKNAV+TVP F+
Sbjct: 128 MLLSKMKAEAEAYIGGPVKNAVVTVPASFD 157
>01_01_0573 +
4253484-4254653,4255526-4255735,4255842-4255937,
4256034-4256255,4256829-4257023,4257097-4257243,
4257323-4257472,4257762-4257892,4257978-4258194
Length = 845
Score = 92.3 bits (219), Expect = 4e-19
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Frame = +1
Query: 277 AVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 456
+V+G DLG + VAV + VV N E R TP+ V F + +R +G + N
Sbjct: 2 SVVGFDLGNESCIVAVARQRGIDVVLNEESKRETPAIVCFGDK-QRFIGTAGAASSTMNP 60
Query: 457 GNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGT---DGKVYSPSXIGAF 627
N+ KRL+GR++ DPE+Q+D+ ++V +G V + +V++P+ + A
Sbjct: 61 KNSVSQIKRLLGRKYSDPELQRDIAAFPFRVSEGPDGFPLVHARYLGEERVFTPTQLMAM 120
Query: 628 VLIKMKETAEXYLNTSVKNAVITVPXYFND 717
VL +K AE LNT+V + I +P YF D
Sbjct: 121 VLSNLKGIAESNLNTAVVDCCIGIPVYFTD 150
>05_01_0550 +
4820086-4821255,4822112-4822321,4822429-4822524,
4822610-4822828,4823201-4823395,4823466-4823612,
4823712-4823861,4825015-4825145,4825234-4825477
Length = 853
Score = 88.2 bits (209), Expect = 6e-18
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Frame = +1
Query: 277 AVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 456
+V+G D+G + VAV + VV N E R TP+ V F + +R +G + N
Sbjct: 2 SVVGFDVGNESGIVAVARQRGIDVVLNEESKRETPAVVCFGDK-QRFIGTAGAASSTMNP 60
Query: 457 GNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGT---DGKVYSPSXIGAF 627
N+ KRL+GR F DPE+Q+D+ + ++V +G V + + ++P+ + A
Sbjct: 61 RNSVSQIKRLLGRAFADPELQRDLASFPFRVSEGPDGFPLVHARYLGEDRAFTPTQLLAM 120
Query: 628 VLIKMKETAEXYLNTSVKNAVITVPXYFND 717
VL +K AE LN +V + I +P YF D
Sbjct: 121 VLSNLKGIAEGNLNAAVFDCCIGIPAYFTD 150
>12_01_0346 + 2652181-2653566
Length = 461
Score = 78.2 bits (184), Expect = 6e-15
Identities = 59/158 (37%), Positives = 80/158 (50%), Gaps = 10/158 (6%)
Frame = +1
Query: 274 GAVIGIDLGTTNSCVAVM--EGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAV 447
G VI +DLG TNSCVA E P + P+ VAF+ +G+ LVG AK
Sbjct: 44 GTVIAVDLGNTNSCVAGYGDEADAPPLFR-----LCIPTSVAFTGDGDALVGEAAKNHPA 98
Query: 448 TNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVV-----RASNGDAWVQGTDGKVYSPS 612
SG KRL+G RF PEV++ ++L YK+V +A G VY+ S
Sbjct: 99 AISG-----FKRLLGTRFGSPEVRRAAEHLPYKIVDWCTMAHIEVNAGAGGAARSVYA-S 152
Query: 613 XIGAFVLIKMKETAEXYL---NTSVKNAVITVPXYFND 717
+ + V+ ++K AE L V NAV+TVP YF+D
Sbjct: 153 DVASMVIAELKARAEARLAGGGKKVHNAVVTVPYYFSD 190
>12_02_0825 +
23476943-23476952,23477263-23477328,23477737-23477885,
23478148-23478212,23479247-23479710,23479724-23480208
Length = 412
Score = 68.5 bits (160), Expect = 5e-12
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Frame = +1
Query: 478 KRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWV----QGTDGKVYSPSXIGAFVLIKMK 645
KRLIG+RF D VQ D+ +KV+ + + +G + K ++ I + VLIKM+
Sbjct: 104 KRLIGQRFTDASVQSDIMLWPFKVIAGPGDKSMIVVQYKGEE-KQFAAEEISSMVLIKMR 162
Query: 646 ETAEXYLNTSVKNAVITVPXYFNDS 720
E AE YL T++K AV+TVP YFN S
Sbjct: 163 EIAEAYLGTTIKKAVVTVPAYFNYS 187
Score = 35.5 bits (78), Expect = 0.043
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = +1
Query: 454 SGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGD 570
S N KRLIGRRF D VQ D+K +KV+ A GD
Sbjct: 20 SRNMAENAKRLIGRRFTDASVQSDIKLWPFKVI-AGPGD 57
>11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836
Length = 526
Score = 64.1 bits (149), Expect = 1e-10
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Frame = +1
Query: 478 KRLIGRRFDDPEVQKDMKNLSYKVVRASNG-DAWVQGTDGKV--YSPSXIGAFVLIKMKE 648
KRLIGRRF D VQ+D+K +KV+ + V +GK + P + A VL K+++
Sbjct: 18 KRLIGRRFSDKSVQEDIKLWPFKVIAGPDDRPTIVVQHEGKEMQFVPEEVSAMVLSKLRD 77
Query: 649 TAEXYLNTSVKNAVITVPXYFNDS 720
A YL+ V +AVITVP YFN++
Sbjct: 78 AAVAYLSEPVTDAVITVPVYFNNA 101
>02_05_0491 +
29470575-29471351,29471574-29471806,29472697-29472856,
29473149-29473394,29473492-29473628,29473874-29474207,
29474283-29474444,29474717-29474791,29474866-29474966,
29475042-29475111,29475210-29475266,29475357-29475418,
29475505-29475577,29475663-29475884
Length = 902
Score = 60.1 bits (139), Expect = 2e-09
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Frame = +1
Query: 277 AVIGIDLGTTNSCVAVME---GKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAV 447
AV IDLG+ VA + G+ P V +E S+ +A +G RL G A
Sbjct: 31 AVASIDLGSEWLKVAAVHLAPGRVPIAVAINEMSKRKSPALAALADGNRLAGEEASGITA 90
Query: 448 TNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGTDGKVYSPSXIGAF 627
+ F + L+ + F + L Y +V + G A V+ DG+VY+ I A
Sbjct: 91 RHPSKVFARARDLLAKPFPYVRSVAEALFLPYDLVPDARGAAAVRADDGQVYTVEEIVAM 150
Query: 628 VLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
VL A+ ++ V++AV+ VP YF +
Sbjct: 151 VLHYAAGLADAHVGAPVRDAVVAVPPYFGQA 181
>05_07_0320 + 29235266-29235305,29235409-29236682
Length = 437
Score = 59.7 bits (138), Expect = 2e-09
Identities = 48/153 (31%), Positives = 69/153 (45%), Gaps = 6/153 (3%)
Frame = +1
Query: 274 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 453
G I +G TNSC+A +P S PS VAF+ L G PA +
Sbjct: 46 GTAAAIYIGNTNSCIAGYH--SPPDTATSYRF-CIPSWVAFTANATTLCGQPAVDHSAAI 102
Query: 454 SGNTFYATKRLIGRRFDDPEVQKDMKNLSYKV-VRASNGDAWVQGTDG-----KVYSPSX 615
SG KRLIG + DP ++ + YK+ + VQ DG + + P
Sbjct: 103 SG-----FKRLIGLQPGDPHAKRVAQIAPYKLGEKIGRCSIQVQLDDGAKCRVEDFLPED 157
Query: 616 IGAFVLIKMKETAEXYLNTSVKNAVITVPXYFN 714
+ ++ +K TAE +L + NAV+TVP +FN
Sbjct: 158 VAGILIAHLKSTAEAHLGHRIDNAVVTVPGHFN 190
>03_02_0180 - 6211823-6213559
Length = 578
Score = 58.4 bits (135), Expect = 5e-09
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Frame = +1
Query: 283 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKE--GERLVGMPAKRQAVTN- 453
IGID+GT+N VAV G ++++N+ + S+V F + + G +
Sbjct: 29 IGIDIGTSNCSVAVWTGHQVELLKNTRNQKGMRSYVMFKDDSLSAGVTGGATREHGHEER 88
Query: 454 ---SGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNG----DAWVQGTDGKVYSPS 612
SG+ + KRLIG R D EV + K+L + V G A + + +P
Sbjct: 89 DILSGSAIFNMKRLIG-RMDTDEVVQASKSLPFLVQTLGIGVRPFIAALVNNMWRSTTPE 147
Query: 613 XIGAFVLIKMKETAEXYLNTSVKNAVITVPXYFN 714
+ A L+++K E +L V+NAV+T+P F+
Sbjct: 148 EVLAIFLLELKALVEMHLKHPVRNAVLTIPVAFS 181
>06_03_1137 +
27903012-27904196,27904330-27904542,27905775-27905867,
27905940-27906008,27906412-27906612,27906688-27906834,
27907524-27907652,27909001-27909131,27909240-27909333
Length = 753
Score = 50.0 bits (114), Expect = 2e-06
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 9/157 (5%)
Frame = +1
Query: 277 AVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 456
+V+G D+G A + V+ N+E +R +P+ VAFS RL+G A A +S
Sbjct: 2 SVVGFDVGNDTLVAAAARQRGIDVLLNAESNRESPAAVAFS-HNARLLGPHAAGAA--SS 58
Query: 457 GNTFYATKRLI---GRRFDDPEVQKDMKNLSYKVVRAS--NGDAWVQGTD--GK--VYSP 609
F + KRL+ GR P D+ L + V +S G + D G+ SP
Sbjct: 59 HAPFSSIKRLLLLAGRPTLLPRRGGDLSRLPFPVEASSADGGGGVLVHVDHIGRRIALSP 118
Query: 610 SXIGAFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
+ + A +L +++ AE L V + VI+VP YF +
Sbjct: 119 TQLLAMLLGYLRQLAEADLEAPVSDCVISVPCYFTQA 155
>06_01_0770 -
5756200-5756741,5756790-5757286,5757356-5757782,
5757854-5757911
Length = 507
Score = 46.0 bits (104), Expect = 3e-05
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 20/165 (12%)
Frame = +1
Query: 268 VRGAVIGIDLGTTNSCVAVMEGK-TPKVVENSEGSRTTPSHVAFSKE-GERLVGMPAKRQ 441
V GA I LG TNSC+A + P + S PS VA + + G + G A +
Sbjct: 66 VLGAAAAIHLGNTNSCIAGYDDDDAPLGAKRSYYQFCIPSWVALAHDNGTVISGEAAMNR 125
Query: 442 AVTNSGNTFYATKRLIGRR------------------FDDPEVQKDMKNLSYKVVRASNG 567
A + A RL+ RR +D V+++++ + YK +
Sbjct: 126 AALSPSTAVSAFMRLLHRRQFPLPSPKFVLGLPDQLGVEDDVVKREIELVPYKFTKMLGW 185
Query: 568 DAWVQGTDGKVYSPSXIGAFVLIKMKETAEXYLNTSVKNAVITVP 702
+ TD + +S + ++ +K TAE +L + NAVIT+P
Sbjct: 186 VSVQLDTDAE-FSVDHLAGILISHLKHTAEAHLGRHINNAVITLP 229
>01_01_0770 - 5968042-5968281,5968799-5969156,5970975-5971384
Length = 335
Score = 31.9 bits (69), Expect = 0.53
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +1
Query: 166 YTQRNFSSILKSNATPTVPIYQRHGVQFRNKSEGVRGAVIGIDLGTTNSCVAVMEGKTPK 345
+T S+L+SN P + I R G +G G +++G T + ++ K
Sbjct: 209 HTDPQIISVLRSNGAPGLEISLRDGAWASVPHDG-DGDSFFVNVGDTLQVLTNGRFRSVK 267
Query: 346 --VVENSEGSRTTPSHVAFSKEGERLVGMPA 432
VV NSE SR + GERL +PA
Sbjct: 268 HRVVVNSEKSRVSMVFFGGPPPGERLAPLPA 298
>01_06_1114 +
34619597-34619972,34620772-34620852,34621294-34621394,
34621958-34622045,34622192-34622457
Length = 303
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -1
Query: 449 VTACRLAGIPTRRSPSFEKATWEGVVREPSLFSTTLGVLPSMTATH 312
VTAC L G+P +PS G EP + + PS ++ H
Sbjct: 121 VTACALLGVPVPMAPSASPMAGLGPSTEPQMPEKSPSASPSESSNH 166
>08_01_0761 -
7296069-7296169,7296516-7296703,7297016-7297026,
7297521-7297811,7298623-7298665,7309343-7309632,
7309719-7310603
Length = 602
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = -3
Query: 444 RLPFGGHSDQTLALFREGHMGGSRPRAFTVFHHLGCLALHDGNARVCRAQIDSNDGSTNT 265
R+ G +D + L H GG RA + H L L +ARV R + G+ N+
Sbjct: 436 RMLIAGVADASTGLLHGNHTGGRVIRAGVRWQH---LVLRGQSARVRRNGLVGARGA-NS 491
Query: 264 LRLVS--KLYAMSLVNRNCG 211
RL+ + ++ S++ ++CG
Sbjct: 492 QRLLKGYRSWSPSVIKKSCG 511
>01_01_0718 - 5578959-5580761,5583683-5584160,5584239-5584267
Length = 769
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +2
Query: 317 LPSWRARHPRWWKTVKALGRLPPMWPSRKRASVWSECPPNGKRSR--IAVTRFTRRRD*S 490
LP AR RWW L PP+ P S S PP K SR + R ++R S
Sbjct: 35 LPPMEARRFRWW--ADELATAPPLPPWSLSPSP-SPPPPPTKPSRRTLGKARAPKKRSIS 91
Query: 491 DVDSTIP 511
D+ + P
Sbjct: 92 DLFAAAP 98
>11_04_0460 -
17955102-17955146,17955253-17955310,17955442-17955593,
17955888-17955993,17956101-17956222,17956766-17956834,
17956969-17957214,17957331-17957373,17957449-17957520,
17957954-17958066,17958158-17958238,17958343-17958415,
17959413-17959519,17960410-17960514,17960684-17960974,
17961621-17961707,17961774-17961842,17961917-17961973,
17962057-17962155,17962223-17962312,17962395-17962511,
17964164-17964244,17964353-17964502,17964812-17964956,
17967359-17967510,17967647-17967784,17967838-17967914,
17968032-17968134
Length = 1015
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 387 MGGSRPRAFTVFHHLGCLALHDGN 316
MG R FHHLGCL L + N
Sbjct: 855 MGNDGARRANSFHHLGCLLLAEHN 878
>04_03_0057 +
10407402-10407452,10407540-10407782,10408506-10408976,
10409058-10409483,10409559-10409618,10409694-10409807,
10409888-10409956
Length = 477
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 350 WKTVKALGRLPPMWPSRKRASVWSECPPNGKR 445
WKT +LG L P RK +VW +C K+
Sbjct: 67 WKTPSSLGHLLRKPPLRKSWAVWYKCVSASKQ 98
>05_02_0119 +
6793292-6793613,6795793-6795952,6796416-6796458,
6797015-6797335
Length = 281
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 102 VERDAGIRPKGFRVHRIKFR--LVYAEKFFVNFEKQRNTHSSYL 227
V D G+R KGFR+ + +R L + + F+ ++ S +L
Sbjct: 154 VSVDGGVRTKGFRIQKQSYRLSLKFRHPYQAKFDSNQSKTSKWL 197
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,549,685
Number of Sequences: 37544
Number of extensions: 469720
Number of successful extensions: 1682
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1631
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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