BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_J24
(722 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY137766-1|AAM94344.1| 78|Anopheles gambiae heat shock protein... 27 0.59
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 25 2.4
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 24 4.1
AY146746-1|AAO12061.1| 333|Anopheles gambiae odorant-binding pr... 24 5.5
EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calc... 23 9.6
AY748841-1|AAV28189.1| 158|Anopheles gambiae cytochrome P450 pr... 23 9.6
>AY137766-1|AAM94344.1| 78|Anopheles gambiae heat shock protein 70
protein.
Length = 78
Score = 27.1 bits (57), Expect = 0.59
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1
Query: 682 NAVITVPXYFNDS 720
+AVITVP YFNDS
Sbjct: 1 DAVITVPAYFNDS 13
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 25.0 bits (52), Expect = 2.4
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -1
Query: 353 STTLGVLPSMTATHEFV--VPRSIPM-TAPRTP 264
+TT+ V P+ T HE V P S P+ APR P
Sbjct: 172 NTTIAVQPAPTQPHELVGTDPLSSPLQAAPREP 204
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 24.2 bits (50), Expect = 4.1
Identities = 25/130 (19%), Positives = 54/130 (41%)
Frame = +1
Query: 97 KMLNATRAFGRKALECTGLSSDLYTQRNFSSILKSNATPTVPIYQRHGVQFRNKSEGVRG 276
+ L + F L G L T RNF ++ATP ++R ++ R ++ ++
Sbjct: 1380 RWLTGSPFFCSVRLIAEGQKRTLATSRNFLLRRGTSATPAGGSFKRRSLKLRRGAKDLKE 1439
Query: 277 AVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 456
+ T+S + + K + + S+ S P ++ +E ++ ++ +S
Sbjct: 1440 VENEYPVRRTDSIQS--KRKVSSLSDRSDNSE--PGQISGGEESPGILSDDQPPESPCDS 1495
Query: 457 GNTFYATKRL 486
++ TK L
Sbjct: 1496 NDSDETTKNL 1505
>AY146746-1|AAO12061.1| 333|Anopheles gambiae odorant-binding
protein AgamOBP43 protein.
Length = 333
Score = 23.8 bits (49), Expect = 5.5
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -1
Query: 353 STTLGVLPSMTATHEFVVPRSIPMTAPRTPSD 258
+ T + + T T + P +IP + R PSD
Sbjct: 279 AATAAAMTTTTTTKKSTPPNAIPALSVRKPSD 310
>EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calcium
channel beta subunitprotein.
Length = 466
Score = 23.0 bits (47), Expect = 9.6
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -2
Query: 439 AVWRAFRPDARPLSRRPHGRESSESLHCFPPPWVSCPP 326
A WRA P RP P S E+ P PP
Sbjct: 419 AYWRATHPPVRPTPSVPRPLPSQEASPSGEQPGRMGPP 456
>AY748841-1|AAV28189.1| 158|Anopheles gambiae cytochrome P450
protein.
Length = 158
Score = 23.0 bits (47), Expect = 9.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 124 GRKALECTGLSSDLYTQRNFSSILKSNATPTVP 222
GR+ +E T + YT+ L+ A+P VP
Sbjct: 70 GRQVIELTDRAEMQYTEAVIMEALRLIASPIVP 102
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 796,090
Number of Sequences: 2352
Number of extensions: 18582
Number of successful extensions: 40
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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