Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_J24
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 248 3e-66
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 241 3e-64
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 156 2e-38
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 152 3e-37
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 152 3e-37
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 149 3e-36
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 146 2e-35
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 139 2e-33
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 139 2e-33
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 134 5e-32
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 107 6e-24
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 107 6e-24
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 79 3e-15
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 75 7e-14
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 29 3.4
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 29 3.4
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 28 5.9
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 28 5.9
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 28 5.9
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 28 5.9
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 248 bits (607), Expect = 3e-66
Identities = 116/157 (73%), Positives = 137/157 (87%)
Frame = +1
Query: 250 RNKSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMP 429
R+ S+ +G VIGIDLGTTNSCV++MEGKTPKV+EN+EG RTTPS VAF+ +GERLVG P
Sbjct: 23 RSLSDKPKGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAP 82
Query: 430 AKRQAVTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGTDGKVYSP 609
AKRQAVTNS NT +ATKRLIGRR++DPEVQKD+K + YK+V+ASNGDAWV+ GKVYSP
Sbjct: 83 AKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVE-AQGKVYSP 141
Query: 610 SXIGAFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
S +GAFVL+KMKETAE YL T+V NAV+TVP YFNDS
Sbjct: 142 SQVGAFVLMKMKETAESYLGTTVNNAVVTVPAYFNDS 178
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 241 bits (591), Expect = 3e-64
Identities = 113/157 (71%), Positives = 134/157 (85%)
Frame = +1
Query: 250 RNKSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMP 429
R+ S+ +G VIGIDLGTTNSCV++MEGKTPKV+EN+EG RTTPS VAF+ +GERLVG P
Sbjct: 23 RSLSDKPKGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAP 82
Query: 430 AKRQAVTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGTDGKVYSP 609
AKRQAVTNS NT +ATKRLIGRR++DPEVQKD+K + YK+V+ASNGDAWV+ GK Y P
Sbjct: 83 AKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVE-AQGKEYPP 141
Query: 610 SXIGAFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
S +GAFVL+KMKETAE YL T+V N V+TVP YFNDS
Sbjct: 142 SQVGAFVLMKMKETAESYLGTTVNNPVVTVPAYFNDS 178
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 156 bits (378), Expect = 2e-38
Identities = 80/150 (53%), Positives = 105/150 (70%), Gaps = 4/150 (2%)
Frame = +1
Query: 283 IGIDLGTTNSCVAV-MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 459
+GIDLGTT SCV V M GK +++ N +G+RTTPS+VAF+ + ERL+G AK Q N
Sbjct: 7 VGIDLGTTYSCVGVFMHGKV-EIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPH 64
Query: 460 NTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQ---GTDGKVYSPSXIGAFV 630
NT + KRLIGR+FDDP VQ DMK+ +KV+ A VQ + K+++P I + V
Sbjct: 65 NTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISSMV 124
Query: 631 LIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
L+KMKETAE +L T+VK+AV+TVP YFNDS
Sbjct: 125 LLKMKETAEAFLGTTVKDAVVTVPAYFNDS 154
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 152 bits (368), Expect = 3e-37
Identities = 77/158 (48%), Positives = 103/158 (65%), Gaps = 3/158 (1%)
Frame = +1
Query: 256 KSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFS-KEGERLVGMPA 432
K E G +IGIDLGTT SCV V + +++ N +G+R TPS+VAFS +G+RL+G A
Sbjct: 27 KKETKYGTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAA 86
Query: 433 KRQAVTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQ--GTDGKVYS 606
K Q N NT + KRLIGR ++D VQ D+K+ +KV+ SN + G+D K ++
Sbjct: 87 KNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFT 146
Query: 607 PSXIGAFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
P + A VL+KMKE AE YL VKNAV+TVP YFND+
Sbjct: 147 PEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDA 184
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 152 bits (368), Expect = 3e-37
Identities = 78/150 (52%), Positives = 104/150 (69%), Gaps = 4/150 (2%)
Frame = +1
Query: 283 IGIDLGTTNSCVAV-MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 459
+GIDLGTT SCV V M GK +++ N +G+RTTPS+VAF+ + ERL+G AK Q N
Sbjct: 7 VGIDLGTTYSCVGVFMHGKV-EIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPH 64
Query: 460 NTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQ---GTDGKVYSPSXIGAFV 630
NT + KRLIGR+FDDP VQ DMK+ +KV+ A VQ + K+++P I + V
Sbjct: 65 NTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISSMV 124
Query: 631 LIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
L+KMK+TAE +L +VK+AV+TVP YFNDS
Sbjct: 125 LLKMKKTAEAFLEPTVKDAVVTVPTYFNDS 154
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 149 bits (360), Expect = 3e-36
Identities = 76/158 (48%), Positives = 102/158 (64%), Gaps = 3/158 (1%)
Frame = +1
Query: 256 KSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFS-KEGERLVGMPA 432
K E +IGIDLGTT SCV V + +++ N +G+R TPS+VAFS +G+RL+G A
Sbjct: 27 KKETKYETIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAA 86
Query: 433 KRQAVTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQ--GTDGKVYS 606
K Q N NT + KRLIGR ++D VQ D+K+ +KV+ SN + G+D K ++
Sbjct: 87 KNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFT 146
Query: 607 PSXIGAFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
P + A VL+KMKE AE YL VKNAV+TVP YFND+
Sbjct: 147 PEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDA 184
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 146 bits (353), Expect = 2e-35
Identities = 75/158 (47%), Positives = 105/158 (66%), Gaps = 3/158 (1%)
Frame = +1
Query: 256 KSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFS-KEGERLVGMPA 432
+ E G +IGIDLGTT SCV V + +++ N +G+R TPS+VAFS +GERL+G A
Sbjct: 24 EKEEKMGTIIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAA 83
Query: 433 KRQAVTNSGNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNG-DAWVQ-GTDGKVYS 606
K Q N NT + KRLIGR +++ VQ+D+K+ +K+V SN + V+ G++ K ++
Sbjct: 84 KNQLTINPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFT 143
Query: 607 PSXIGAFVLIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
P + A VL KMK+ AE YL VKNAV+TVP YFND+
Sbjct: 144 PEEVSAMVLTKMKQIAESYLGHEVKNAVVTVPAYFNDA 181
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 139 bits (337), Expect = 2e-33
Identities = 78/150 (52%), Positives = 101/150 (67%), Gaps = 4/150 (2%)
Frame = +1
Query: 283 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 462
IGIDLGTT SCV + + +++ NSEG++TTPS+VAF+ + ERLVG AK QA N N
Sbjct: 7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPEN 65
Query: 463 TFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNG----DAWVQGTDGKVYSPSXIGAFV 630
T + KRLIGRRFD+ VQ D K+ + V + G + V+G + + ++P I A V
Sbjct: 66 TVFDAKRLIGRRFDESTVQSDCKHWPFGV-KGKQGKPVIEVEVKG-EKRQFNPEEISAMV 123
Query: 631 LIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
L KMKETAE YL +VK+AVITVP YFNDS
Sbjct: 124 LQKMKETAETYLGHTVKDAVITVPAYFNDS 153
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 139 bits (337), Expect = 2e-33
Identities = 78/150 (52%), Positives = 101/150 (67%), Gaps = 4/150 (2%)
Frame = +1
Query: 283 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 462
IGIDLGTT SCV + + +++ NSEG++TTPS+VAF+ + ERLVG AK QA N N
Sbjct: 7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPEN 65
Query: 463 TFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNG----DAWVQGTDGKVYSPSXIGAFV 630
T + KRLIGRRFD+ VQ D K+ + V + G + V+G + + ++P I A V
Sbjct: 66 TVFDAKRLIGRRFDESTVQSDCKHWPFGV-KGKQGKPVIEVEVKG-EKRQFNPEEISAMV 123
Query: 631 LIKMKETAEXYLNTSVKNAVITVPXYFNDS 720
L KMKETAE YL +VK+AVITVP YFNDS
Sbjct: 124 LQKMKETAETYLGHTVKDAVITVPAYFNDS 153
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 134 bits (325), Expect = 5e-32
Identities = 75/149 (50%), Positives = 98/149 (65%), Gaps = 3/149 (2%)
Frame = +1
Query: 283 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 462
IGIDLGTT SCV + + +++ NSEG++TTPS+VAF+ + ERLVG AK QA N N
Sbjct: 7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPEN 65
Query: 463 TFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQ---GTDGKVYSPSXIGAFVL 633
T + KRLIGRRFD+ VQ D+K+ + V+ G V+ + + ++ I A VL
Sbjct: 66 TVFDAKRLIGRRFDEETVQSDIKHWPF-TVKGKQGKPVVEVEVKGEKREFNAEEISAMVL 124
Query: 634 IKMKETAEXYLNTSVKNAVITVPXYFNDS 720
KMKETAE L SV++AVITVP YFNDS
Sbjct: 125 QKMKETAEAVLGHSVRDAVITVPAYFNDS 153
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 107 bits (258), Expect = 6e-24
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 3/147 (2%)
Frame = +1
Query: 283 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 462
IGIDLGTT SCVA + ++EN G RTTPS +A ++G+ L+G AK + + N
Sbjct: 3 IGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAK-DVIGKATN 61
Query: 463 TFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQ---GTDGKVYSPSXIGAFVL 633
+ + KR+IGRR+DD +Q+DM +KV + NG +++ +S + + +L
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLIL 121
Query: 634 IKMKETAEXYLNTSVKNAVITVPXYFN 714
+K AE L VK+AVITVP YFN
Sbjct: 122 RCLKYNAERKLGLEVKSAVITVPAYFN 148
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 107 bits (258), Expect = 6e-24
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 3/147 (2%)
Frame = +1
Query: 283 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 462
IGIDLGTT SCVA + ++EN G RTTPS +A ++G+ L+G AK + + N
Sbjct: 3 IGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAK-DVIGKATN 61
Query: 463 TFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQ---GTDGKVYSPSXIGAFVL 633
+ + KR+IGRR+DD +Q+DM +KV + NG +++ +S + + +L
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLIL 121
Query: 634 IKMKETAEXYLNTSVKNAVITVPXYFN 714
+K AE L VK+AVITVP YFN
Sbjct: 122 RCLKYNAERKLGLEVKSAVITVPAYFN 148
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 79.0 bits (186), Expect = 3e-15
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 5/152 (3%)
Frame = +1
Query: 277 AVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 456
+V+G D+G N + V +V+ N TP+ V+F + +R +G+ A++ TN
Sbjct: 2 SVLGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPK-DRSMGVAARQAVTTNI 60
Query: 457 GNTFYATKRLIGRRFDDPEVQKDMKNLSYKVVRASNGDAWVQGT---DGKVYSPSXIGAF 627
NT K LIGR+F DP Q+ + + KVV+ N D VQ + + ++P + A
Sbjct: 61 KNTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAA 120
Query: 628 VLIKMKETAEXYLN--TSVKNAVITVPXYFND 717
+L K++ E L+ V + V+ VP YF D
Sbjct: 121 LLTKLRTIVESQLSDVKKVSDCVLAVPSYFTD 152
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 74.5 bits (175), Expect = 7e-14
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 7/153 (4%)
Frame = +1
Query: 280 VIGIDLGTTNSCVAVMEGKTPK--VVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 453
+ GIDLGTT S + + T + ++ + G ++ PS VAF G L+G A Q N
Sbjct: 35 IAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHN 94
Query: 454 SGNTFYATKRLIGRRFD--DPEVQKDMKNLSYKVVRASNGDAWVQ---GTDGKVYSPSXI 618
T Y KR IGR F+ + + D K +K+ S G A+ + + K P I
Sbjct: 95 PKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEI 154
Query: 619 GAFVLIKMKETAEXYLNTSVKNAVITVPXYFND 717
G+ ++ +K A +L ++ VI+ P FN+
Sbjct: 155 GSLIIGYLKSAAAKHLGVTLGQVVISCPAEFNE 187
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 42.7 bits (96), Expect = 3e-04
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Frame = +1
Query: 277 AVIGIDLGTTNSCVAVMEGKTPK-VVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 453
A + IDLGT + +++ P + N+E R TP+ V ++G R A V
Sbjct: 25 AAMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPN-VVMIQDGHRTFADAAIGMQVRY 83
Query: 454 SGNTFYATKRLIGRRFDDPEVQK-DMKNLSYKVVRASNGDAWVQ-GTDGKVYSPSXIGAF 627
L+G+ P + +N ++V A + + G+ Y+ + A
Sbjct: 84 PHLVHGQLNDLVGKSTQHPSFELFKRRNTFFEVDDAPKNASSINFKLGGESYTVEALTAM 143
Query: 628 VLIKMKETAEXYLNTS-VKNAVITVPXYF 711
+L K+ E Y + +K+ VITVP YF
Sbjct: 144 ILANAKKFTEEYAQAAEIKDVVITVPVYF 172
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Frame = +2
Query: 200 ATQHPQFLFTSDMAYNLETSLRVFV------EPSLESIWARQTRALPSWRARHPRWWKTV 361
AT H +F + Y+ E + F+ P + S T+ LP R R
Sbjct: 572 ATDHCRFRSMTPKEYDYELEVDGFIALLNGASPEVSSASGTSTKTLPGGRVSRKRTHDEA 631
Query: 362 KALGRLPPMWPSRKRASVW 418
+PP R+R VW
Sbjct: 632 DDSNSVPPTEFGRRRVEVW 650
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Frame = +2
Query: 200 ATQHPQFLFTSDMAYNLETSLRVFV------EPSLESIWARQTRALPSWRARHPRWWKTV 361
AT H +F + Y+ E + F+ P + S T+ LP R R
Sbjct: 572 ATDHCRFRSMTPKEYDYELEVDGFIALLNGASPEVSSASGTSTKTLPGGRVSRKRTHDEA 631
Query: 362 KALGRLPPMWPSRKRASVW 418
+PP R+R VW
Sbjct: 632 DDSNSVPPTEFGRRRVEVW 650
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 334 KTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 456
K KV EN + S+ +P H S G +G P +++T S
Sbjct: 216 KHTKVHENEKKSQLSPEHDESSDSGNASIGTPTTDESLTFS 256
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 334 KTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 456
K KV EN + S+ +P H S G +G P +++T S
Sbjct: 229 KHTKVHENEKKSQLSPEHDESSDSGNASIGTPTTDESLTFS 269
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = +2
Query: 278 PSLESIWARQTRALPSWRARHPRW---WKTVKALGRLPPMWPSRKRASVWSEC 427
P +ES R T P W P W W TV A P + + V EC
Sbjct: 642 PDVESHMIRFTTQSPEWATPSPTWNPAWNTVTAEEETPGIPIIHSQCQVNGEC 694
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 334 KTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 456
K KV EN + S+ +P H S G +G P +++T S
Sbjct: 217 KHTKVHENEKKSQLSPEHDESSDSGNASIGTPTTDESLTFS 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,424,277
Number of Sequences: 27780
Number of extensions: 390630
Number of successful extensions: 1113
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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