Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_J20
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 267 5e-72
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 267 5e-72
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 267 5e-72
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 154 4e-38
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 154 4e-38
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 103 8e-23
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 100 9e-22
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 75 5e-14
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 67 8e-12
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 64 7e-11
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 64 7e-11
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 58 6e-09
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 46 2e-05
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 45 5e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 41 6e-04
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 41 6e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 38 0.004
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 38 0.004
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 35 0.040
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 33 0.12
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 33 0.21
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 33 0.21
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 32 0.28
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 29 2.0
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 3.4
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 29 3.4
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 29 3.4
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 28 4.5
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 4.5
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 27 7.9
U58764-4|AAB00726.2| 216|Caenorhabditis elegans Hypothetical pr... 27 7.9
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 27 7.9
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 27 7.9
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 121 FAGKQLEDGRTLSDY 135
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 196
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 197 FAGKQLEDGRTLSDY 211
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 272
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 273 FAGKQLEDGRTLSDY 287
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 348
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 349 FAGKQLEDGRTLSDY 363
Score = 264 bits (648), Expect = 3e-71
Identities = 131/135 (97%), Positives = 131/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTL GKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 424
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 425 FAGKQLEDGRTLSDY 439
Score = 242 bits (593), Expect = 1e-64
Identities = 120/123 (97%), Positives = 120/123 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 500
Query: 562 FAG 570
FAG
Sbjct: 501 FAG 503
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 393 IHTSSCTASSWRHADLRENSDRKDHHFGSRSFGHN 497
+++S S R+ADLR++ D K+HH RSFGH+
Sbjct: 504 VYSSFGAPSQRRYADLRQDFDWKNHHSRGRSFGHH 538
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 121 FAGKQLEDGRTLSDY 135
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 196
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 197 FAGKQLEDGRTLSDY 211
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 272
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 273 FAGKQLEDGRTLSDY 287
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 348
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 349 FAGKQLEDGRTLSDY 363
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 576
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 577 FAGKQLEDGRTLSDY 591
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 593 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 652
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 653 FAGKQLEDGRTLSDY 667
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 728
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 729 FAGKQLEDGRTLSDY 743
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 745 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 804
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 805 FAGKQLEDGRTLSDY 819
Score = 264 bits (648), Expect = 3e-71
Identities = 131/135 (97%), Positives = 131/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTL GKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 424
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 425 FAGKQLEDGRTLSDY 439
Score = 264 bits (648), Expect = 3e-71
Identities = 131/135 (97%), Positives = 131/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 500
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 501 FAGKQLEDGRTLSDY 515
Score = 154 bits (373), Expect = 5e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 382 IQKESTLHLVLRLRGG 429
IQKESTLHLVLRLRGG
Sbjct: 821 IQKESTLHLVLRLRGG 836
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 121 FAGKQLEDGRTLSDY 135
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 196
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 197 FAGKQLEDGRTLSDY 211
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 272
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 273 FAGKQLEDGRTLSDY 287
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 348
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 349 FAGKQLEDGRTLSDY 363
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 424
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 425 FAGKQLEDGRTLSDY 439
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 441 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 500
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 501 FAGKQLEDGRTLSDY 515
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 517 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 576
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 577 FAGKQLEDGRTLSDY 591
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 593 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 652
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 653 FAGKQLEDGRTLSDY 667
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 669 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 728
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 729 FAGKQLEDGRTLSDY 743
Score = 267 bits (654), Expect = 5e-72
Identities = 132/135 (97%), Positives = 132/135 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 382 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLI 561
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLI
Sbjct: 745 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 804
Query: 562 FAGKQLEXGRTLSDY 606
FAGKQLE GRTLSDY
Sbjct: 805 FAGKQLEDGRTLSDY 819
Score = 153 bits (370), Expect = 1e-37
Identities = 74/76 (97%), Positives = 75/76 (98%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 382 IQKESTLHLVLRLRGG 429
IQK+STLHLVLRLRGG
Sbjct: 821 IQKQSTLHLVLRLRGG 836
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 154 bits (374), Expect = 4e-38
Identities = 75/77 (97%), Positives = 76/77 (98%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 382 IQKESTLHLVLRLRGGM 432
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 117 bits (281), Expect = 8e-27
Identities = 57/59 (96%), Positives = 57/59 (96%)
Frame = +1
Query: 430 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDY 606
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLE GRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 154 bits (374), Expect = 4e-38
Identities = 75/77 (97%), Positives = 76/77 (98%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 382 IQKESTLHLVLRLRGGM 432
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 117 bits (281), Expect = 8e-27
Identities = 57/59 (96%), Positives = 57/59 (96%)
Frame = +1
Query: 430 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDY 606
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIPPDQQRLIFAGKQLE GRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 103 bits (248), Expect = 8e-23
Identities = 47/76 (61%), Positives = 59/76 (77%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
M I VKTLTGK I L++EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 382 IQKESTLHLVLRLRGG 429
+ S LHLVL LRGG
Sbjct: 61 VLGGSVLHLVLALRGG 76
Score = 77.4 bits (182), Expect = 7e-15
Identities = 34/59 (57%), Positives = 45/59 (76%)
Frame = +1
Query: 430 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDY 606
M I VKTLTGK I L++E +D + +K K+++KEGIPP QQRLIFAGKQ+ +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADY 59
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 100 bits (239), Expect = 9e-22
Identities = 53/128 (41%), Positives = 79/128 (61%)
Frame = +1
Query: 223 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 402
+TG IT VE SD I+++ K+ + + P ++ +D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 403 HLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLE 582
L + ++ + + VKTL GKTI + ++ +DT+ +K K+Q+K G+PPDQQRLIF QLE
Sbjct: 152 RLEVPVKEKLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLE 211
Query: 583 XGRTLSDY 606
R L Y
Sbjct: 212 NDRALFAY 219
Score = 85.4 bits (202), Expect = 3e-17
Identities = 39/74 (52%), Positives = 53/74 (71%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
+ + VKTL GKTI + ++ +DT+E +K K+Q+K G+PPDQQRLIF QLE+ R L YN
Sbjct: 161 LTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYN 220
Query: 382 IQKESTLHLVLRLR 423
I+ E +HLV R R
Sbjct: 221 IRDEDIIHLVSRHR 234
Score = 33.9 bits (74), Expect = 0.091
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 309
M + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 59 MLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 430 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGI 537
M + VKT TGKTIT+E NVK +++DK+G+
Sbjct: 59 MLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 74.5 bits (175), Expect = 5e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 312
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
Score = 74.1 bits (174), Expect = 7e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +1
Query: 430 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIP 540
MQIFVKTLTGKTITLEVEASDTI NVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 67.3 bits (157), Expect = 8e-12
Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTLS 372
++I+V+ G+T TL+ SDT+ +VKAKI +K I P+ Q+L+ L+ D TL
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161
Query: 373 DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 480
D + + STL L + + + +FVKT TGKTIT+ +
Sbjct: 162 DNSFENGSTLRLEVSIEKEIDVFVKTYTGKTITISI 197
Score = 48.8 bits (111), Expect = 3e-06
Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Frame = +1
Query: 250 VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK-QLEDGRTLSDYNIQKESTLHLVLRLRG 426
+E DT+++VK IQ+ + P + + +E + + N++ T +
Sbjct: 46 IEMEDTVQDVK--IQEAQQAPLRESEEVTEDPISVESSEVIGNLNVKVAETQQELHH--E 101
Query: 427 GMQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLE 582
G++I+V+ G+T TL+ ASDT+ +VKAKI +K I P+ Q+L+ L+
Sbjct: 102 GIRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLD 152
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 309
M + +KT TGK IT+E S VK +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 430 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGI 537
M + +KT TGK IT+E S VK +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 64.1 bits (149), Expect = 7e-11
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = +1
Query: 208 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 387
+FVKTL +T+ LEV ++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 388 KESTLHLVLRLRGG 429
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
Score = 54.0 bits (124), Expect = 8e-08
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +1
Query: 436 IFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLE 582
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLE
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLE 49
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 64.1 bits (149), Expect = 7e-11
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = +1
Query: 208 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 387
+FVKTL +T+ LEV ++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 388 KESTLHLVLRLRGG 429
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
Score = 54.0 bits (124), Expect = 8e-08
Identities = 25/49 (51%), Positives = 38/49 (77%)
Frame = +1
Query: 436 IFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLE 582
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLE
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLE 49
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 57.6 bits (133), Expect = 6e-09
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = +1
Query: 205 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 384
QIFVK L G + ++ DT+ ++K I+ + IP L F+GK+LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 385 QKESTLHLVLR 417
QK ST+ + R
Sbjct: 214 QKSSTITMYFR 224
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/58 (36%), Positives = 33/58 (56%)
Frame = +1
Query: 433 QIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDY 606
QIFVK L G + ++ DT+ ++K I+ + IP L F+GK+LE ++ DY
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDY 211
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +1
Query: 436 IFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGK 573
+FVKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/46 (43%), Positives = 33/46 (71%)
Frame = +1
Query: 208 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 345
+FVKTL +T+ LEV ++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 44.8 bits (101), Expect = 5e-05
Identities = 28/72 (38%), Positives = 37/72 (51%)
Frame = +1
Query: 205 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 384
Q FV+ L GKT TL V SDT+E K ++ R+ + GK L D T +YNI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 385 QKESTLHLVLRL 420
ST+ L R+
Sbjct: 99 SNNSTMDLHFRI 110
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +1
Query: 433 QIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDY 606
Q FV+ L GKT TL V ASDT+ K ++ R+ + GK L T +Y
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEY 96
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = +1
Query: 226 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 405
+G L V SDTI VK I + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 406 L 408
L
Sbjct: 241 L 241
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 41.1 bits (92), Expect = 6e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = +1
Query: 223 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 402
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 403 HLVLRLRGG 429
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 41.1 bits (92), Expect = 6e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = +1
Query: 223 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 402
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 403 HLVLRLRGG 429
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +1
Query: 244 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 423
L V SDTI ++K +I + R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +1
Query: 199 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLS 372
++ + +TLT LE+ TI VKA + ++G P+ Q+LI+ GK L+D +
Sbjct: 51 VLSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDSVKVG 110
Query: 373 DYNIQKESTLHLVLRLR 423
+ + ++L R
Sbjct: 111 EVGFDSSKFVVVMLSKR 127
Score = 33.9 bits (74), Expect = 0.091
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 430 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEG--IPPDQQRLIFAGKQLE 582
+ + +TLT LE+ TI VKA + ++G P+ Q+LI+ GK L+
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILD 104
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +1
Query: 244 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 402
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 35.1 bits (77), Expect = 0.040
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = +1
Query: 220 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 399
++ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY + +++
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTS 206
Query: 400 LHLVLR 417
+ L++R
Sbjct: 207 VELLVR 212
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 448 TLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDY 606
++ G+ ++ +++ +K KI+ + GIP + L GK L + L+DY
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 33.5 bits (73), Expect = 0.12
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = +1
Query: 217 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 396
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 397 TLHLV 411
+ L+
Sbjct: 73 QIMLL 77
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 445 KTLTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSD 603
KT + +TL + + I ++ ++ IP D+ ++F GK+L + D
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRD 65
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 382 IQKESTLHLVLR 417
I T+HLV R
Sbjct: 81 ISDGQTVHLVDR 92
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 381
+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 382 IQKESTLHLVLR 417
I T+HLV R
Sbjct: 81 ISDGQTVHLVDR 92
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 32.3 bits (70), Expect = 0.28
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 223 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 402
L G I +E++ DTI V + G+ +QRL+ K+L+ +TL + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
Score = 31.9 bits (69), Expect = 0.37
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 451 LTGKTITLEVEASDTIXNVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSD 603
L G I +E+++ DTI V + G+ +QRL+ K+L+ +TL +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEE 239
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/53 (20%), Positives = 29/53 (54%)
Frame = +1
Query: 199 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 357
++Q+ + + TGK++ + VE + +E D+EG+ L+ + ++ ++
Sbjct: 1148 VLQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 202 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 378
M + +KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 379 NIQK 390
IQ+
Sbjct: 56 KIQE 59
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 430 MQIFVKTLTGKTITLEVEASDTIXNVKAKIQDKEGI 537
M + +KT TGKTIT+E S VK +++ K+G+
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGV 31
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 214 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 312
+ TL G+TI V P + I + K+ EG+P
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMP 311
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 199 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 339
+M +TLTG I + EP + KA +Q E P + QR++ A
Sbjct: 538 VMASVYQTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 199 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 339
+M +TLTG I + EP + KA +Q E P + QR++ A
Sbjct: 538 VMASVYQTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 244 LEVEPSDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 408
+EV S I V+ K+ + + L + G++L+D R++ YNI + ++L
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYL 155
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +3
Query: 306 NSS*STASHLCWQAAGRRTHLVRLQHSKRIHTSSCTASSWRHADLRENSDRKDHH 470
+SS S++S + + H V+ H K +SS ++SS + + D K HH
Sbjct: 221 SSSSSSSSESEDEKHHHKKHAVKKHHKKAESSSSSSSSSSSSSSSSSSEDEKHHH 275
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 27.5 bits (58), Expect = 7.9
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = -2
Query: 388 FECCSLTRCVRLPAACQQR*DAVDQEEFLLC 296
F C + C+R P C + + +++E +C
Sbjct: 275 FNCTDVNECLRRPEMCNKNAECINREGSFIC 305
>U58764-4|AAB00726.2| 216|Caenorhabditis elegans Hypothetical
protein M03E7.5 protein.
Length = 216
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = -3
Query: 447 FHEDLHASTKTQYKMKCGFFLNVVV*QGASVFQLLASKDETLLIRRNSFFVLDLRLHILN 268
F E+L+ + K +Y ++ ++ QGASVF+ L + LL R F L L I +
Sbjct: 122 FDEELNLNDKLKYSDN---MIDQMLAQGASVFEDLQKQKYNLLSIRKRFHFLTKSLGISD 178
Query: 267 CVRRL 253
RL
Sbjct: 179 TTIRL 183
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 27.5 bits (58), Expect = 7.9
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = -2
Query: 388 FECCSLTRCVRLPAACQQR*DAVDQEEFLLC 296
F C + C+R P C + + +++E +C
Sbjct: 275 FNCTDVNECLRRPEMCNKNAECINREGSFIC 305
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 27.5 bits (58), Expect = 7.9
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = -2
Query: 388 FECCSLTRCVRLPAACQQR*DAVDQEEFLLC 296
F C + C+R P C + + +++E +C
Sbjct: 275 FNCTDVNECLRRPEMCNKNAECINREGSFIC 305
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,323,253
Number of Sequences: 27780
Number of extensions: 258926
Number of successful extensions: 799
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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