Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_J18
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 81 7e-16
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 79 4e-15
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 73 2e-13
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 72 5e-13
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 72 5e-13
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 64 1e-10
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 31 0.94
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 31 0.94
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 31 0.94
U50311-5|AAX22295.1| 299|Caenorhabditis elegans Serpentine rece... 29 3.8
AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical... 29 3.8
U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer ... 29 5.0
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 81.4 bits (192), Expect = 7e-16
Identities = 42/99 (42%), Positives = 59/99 (59%)
Frame = +1
Query: 34 LKMEFVGKSIQVCLPPSHFDXFMXPIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTF 213
+ EFVG+ + +F+ +M +GVGLITRKAA + PT+E++ +GD + STF
Sbjct: 1 MSQEFVGR--WKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTF 58
Query: 214 KTTEMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK 330
K T + FK G+EF+E DG VKSV FE +QK
Sbjct: 59 KNTTLSFKLGQEFDETTPDGRTVKSVVNFENGKFIHIQK 97
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 79.0 bits (186), Expect = 4e-15
Identities = 47/118 (39%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = +1
Query: 85 HFDXFMXPIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 264
+FD +M IGVGLITRKAA + P +E+R DG+ +N STFK T++ FK GEEF E+
Sbjct: 18 NFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTKLSFKLGEEFVENS 77
Query: 265 ADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMT--AKDVTCTRVYK 432
D S+ TFE L Q + V E K + T + DV C R ++
Sbjct: 78 PDDRTYNSLFTFENGKLTHRQNKIKENHKSSVLTTWLENGKLIQTYQSGDVICRREWE 135
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 72.9 bits (171), Expect = 2e-13
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 2/131 (1%)
Frame = +1
Query: 43 EFVGKSIQVCLPPSHFDXFMXPIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 222
+FVG+ V +F+ ++ +GVGL+ RKAA A PT+E++ +G+++++ STFK T
Sbjct: 5 QFVGRWKLV--ESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNT 62
Query: 223 EMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQK--APDGLEVTYVREFGPEEMKAVM 396
++F G EF+E DG + KS T E + VQK + R F E++ +
Sbjct: 63 TLEFTLGVEFDETTPDGRQFKSTITIEDGKVVHVQKRIKDSDHDSVITRWFEGEKLITTL 122
Query: 397 TAKDVTCTRVY 429
+ V R Y
Sbjct: 123 QSGSVISRRAY 133
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 71.7 bits (168), Expect = 5e-13
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = +1
Query: 85 HFDXFMXPIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 264
+FD ++ +GVG R A P +E +GDE+ + ++STFK +K+K G +E
Sbjct: 18 NFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEKT 77
Query: 265 ADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTCTRVYK 432
ADG V SV + E + L Q++ G + + + + ++ V T V CTRVY+
Sbjct: 78 ADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKCTRVYE 134
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 71.7 bits (168), Expect = 5e-13
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 1/117 (0%)
Frame = +1
Query: 85 HFDXFMXPIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 264
+FD ++ +GVG R A P +E +GDE+ + ++STFK +K+K G +E
Sbjct: 33 NFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEKT 92
Query: 265 ADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTCTRVYK 432
ADG V SV + E + L Q++ G + + + + ++ V T V CTRVY+
Sbjct: 93 ADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKCTRVYE 149
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 63.7 bits (148), Expect = 1e-10
Identities = 33/87 (37%), Positives = 52/87 (59%)
Frame = +1
Query: 43 EFVGKSIQVCLPPSHFDXFMXPIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 222
EF+G+ V +F+ ++ IGVGL+ RKAA+ +PT+E++ DGD ++ STFK
Sbjct: 6 EFIGRWKLV--HSENFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNN 63
Query: 223 EMKFKPGEEFEEDRADGAKVKSVCTFE 303
++ FK E+F E D ++ TFE
Sbjct: 64 KLAFKIREKFVEIAPDERSYNTLVTFE 90
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 31.1 bits (67), Expect = 0.94
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 82 SHFDXFMXP-IGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 240
S +D + P IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 3 SEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 31.1 bits (67), Expect = 0.94
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 82 SHFDXFMXP-IGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 240
S +D + P IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 3 SEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 31.1 bits (67), Expect = 0.94
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 82 SHFDXFMXP-IGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 240
S +D + P IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 3 SEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U50311-5|AAX22295.1| 299|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform c protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 475 ADSRTSRGTIMFI*HLFYTLALSSFFVKLILVFTSVIVCRSNC 603
ADS + G I+F HLF+ + S F L+ + T + V +C
Sbjct: 51 ADSLHNYGQIIFTAHLFFDIQTSHFVCTLLNIPTLIGVISGSC 93
>AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical
protein Y71H2AM.17 protein.
Length = 338
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 130 RKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEE 258
+ A + TP D+ + T++T TTE K KP E+ EE
Sbjct: 296 KPAESTETPAAGTEPSTDDGAIETTTTTTTTENKEKPEEKMEE 338
>U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform b protein.
Length = 864
Score = 28.7 bits (61), Expect = 5.0
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 34 LKMEFVGKSIQVCLPPSHFDXFMXPIGVG 120
+K + VG+++QVC+ P H++ + + VG
Sbjct: 292 MKSDMVGEALQVCVNPYHYEIVIGTMIVG 320
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,052,478
Number of Sequences: 27780
Number of extensions: 309063
Number of successful extensions: 778
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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