SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_J18
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...   137   1e-34
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    58   9e-11
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    44   2e-06
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    26   0.46 
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    24   1.9  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   3.3  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   4.3  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   5.7  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   5.7  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   5.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   9.9  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score =  137 bits (332), Expect = 1e-34
 Identities = 68/132 (51%), Positives = 89/132 (67%)
 Frame = +1

Query: 43  EFVGKSIQVCLPPSHFDXFMXPIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTT 222
           +F+GK  ++     +FD FM  +GVG++TRK  ++V+P VEL ++   Y L T+S FK T
Sbjct: 3   DFLGKRYKL-YSSENFDDFMKALGVGIMTRKVGSSVSPVVELTENNGLYTLKTTSPFKNT 61

Query: 223 EMKFKPGEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTA 402
           E+KFK GEEFEE+  DG KVKSVCT +GN L QVQK     + T  REF   EMKA+M  
Sbjct: 62  EIKFKLGEEFEEETVDGRKVKSVCTLDGNKLIQVQKGEK--QTTIEREFSSTEMKAIMKV 119

Query: 403 KDVTCTRVYKVQ 438
            D+ CTRVYK+Q
Sbjct: 120 DDIICTRVYKIQ 131


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 58.0 bits (134), Expect = 9e-11
 Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
 Frame = +1

Query: 154 PTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEE--DRADGAKVKSVCTFEGNTLKQVQ 327
           P+ EL K+GDE+   +SS   T    FK    FEE        K ++V + EGNT K   
Sbjct: 37  PSFELSKNGDEWTFTSSSGDNTYTKTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFKTET 96

Query: 328 KAPDGLEVTYVREFGPEEMKA-VMTAK-DVTCTRVYK 432
           +  D L+VT + EF   E+   + T K DV  TRVYK
Sbjct: 97  QVNDSLKVTRLYEFSDNELLVHISTNKSDVKATRVYK 133


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 44.0 bits (99), Expect = 2e-06
 Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = +1

Query: 154 PTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEE--DRADGAKVKSVCTFEGNTLKQVQ 327
           P+ EL K+GDE+   +SS   T    FK    FEE        K ++V + EGNT K   
Sbjct: 35  PSFELSKNGDEWTFTSSSGDNTYTKTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFKTET 94

Query: 328 KAPDGLEVT 354
           +  D L+VT
Sbjct: 95  QVNDSLKVT 103


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 25.8 bits (54), Expect = 0.46
 Identities = 16/52 (30%), Positives = 21/52 (40%)
 Frame = -3

Query: 492 GCSRIGGTDSRPRSRVLLLDLVDSGASHVLSCHHSFHLLRAEFPDVSDFKTV 337
           GC          RSR+  L   D G S   S   +  L+R E  D  D +T+
Sbjct: 13  GCDEQTSRGDNDRSRIARLGRDDGGKSRQSSFEVTSLLMREETEDAEDTQTL 64


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 679 AFIVFKNTFIVYIKPKLTF 735
           AFI +   F +Y++P  TF
Sbjct: 126 AFISYGTLFFIYVQPSATF 144


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 679 AFIVFKNTFIVYIKPKLTF 735
           AFI +   F +Y+ P  TF
Sbjct: 127 AFISYGTLFFIYVHPSATF 145


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -1

Query: 230 FISVVLKVEEVTKLYSSPSLRSSTV 156
           FIS+++  +E+  + +SP L + T+
Sbjct: 9   FISLIILNDEIYNIIASPQLNNPTL 33


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 292 CTFEGNTLKQVQKAPDGL 345
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 292 CTFEGNTLKQVQKAPDGL 345
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 292 CTFEGNTLKQVQKAPDGL 345
           CT EGN LK+V   PD L
Sbjct: 57  CTAEGNELKRV--LPDAL 72


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 55  KSIQVCLPPSHF 90
           K+++VCLPP  +
Sbjct: 434 KNLKVCLPPGQY 445


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,503
Number of Sequences: 438
Number of extensions: 3953
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -