Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_J12
(684 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 274 1e-72
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 252 8e-66
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 228 1e-58
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 213 4e-54
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 187 3e-46
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 178 1e-43
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 173 3e-42
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 128 9e-29
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 128 1e-28
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 116 4e-25
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 93 6e-18
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 93 8e-18
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 83 6e-15
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 76 9e-13
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 71 2e-11
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 61 2e-08
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 58 2e-07
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 43 0.008
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 38 0.30
UniRef50_Q3SAD8 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 34 3.7
UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;... 33 6.5
UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina ... 33 6.5
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 8.6
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 274 bits (673), Expect = 1e-72
Identities = 125/162 (77%), Positives = 141/162 (87%)
Frame = +3
Query: 165 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 344
R RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+
Sbjct: 47 RVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDS 106
Query: 345 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 524
TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF
Sbjct: 107 TPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQF 166
Query: 525 HTGRLLACVASRPGQCGRADGYILXGKELEFYLRKIKSKRAK 650
G+LLAC+ASRPGQCGRADGY+L GKELEFYLRKIK+++ K
Sbjct: 167 QQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +2
Query: 71 GNVRPYASQXKYELGRPAANTRLGPQRIHS 160
G +PY + KYELGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 38.3 bits (85), Expect = 0.17
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 25 LGLSRXHWHQRRATGGKRAPIRK 93
+G+SR +WH+RR TGGKR P K
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHK 23
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 252 bits (616), Expect = 8e-66
Identities = 116/162 (71%), Positives = 138/162 (85%), Gaps = 2/162 (1%)
Frame = +3
Query: 165 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 344
R+RGGNTK RALRL+TGNF+W SE RKTRI DVVYNASNNELVRTKTLVKN+IVV+DA
Sbjct: 47 RTRGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDA 106
Query: 345 TPFRQWYESHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGALEE 518
TPFRQWYE+HY LPLGRK+ K + E+ ++ KKRS+K +KYL RQ+ KVE ALE+
Sbjct: 107 TPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALED 166
Query: 519 QFHTGRLLACVASRPGQCGRADGYILXGKELEFYLRKIKSKR 644
QF +GR+LAC++SRPGQCGR+DGYIL GKELEFYL+KIKSK+
Sbjct: 167 QFTSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIKSKK 208
Score = 36.7 bits (81), Expect = 0.53
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 71 GNVRPYASQXKYELGRPAANTRLGPQRIH 157
G + + K+ELGRPAANT+LG R+H
Sbjct: 16 GKRKSLRKKRKFELGRPAANTKLGSGRVH 44
Score = 33.9 bits (74), Expect = 3.7
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 25 LGLSRXHWHQRRATGGKRAPIRK 93
+G+SR H+RRATGGKR +RK
Sbjct: 1 MGISRDSAHKRRATGGKRKSLRK 23
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 228 bits (557), Expect = 1e-58
Identities = 110/157 (70%), Positives = 127/157 (80%)
Frame = +3
Query: 180 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 359
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQ
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQ 91
Query: 360 WYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRL 539
WYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LEEQF G+L
Sbjct: 92 WYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKL 151
Query: 540 LACVASRPGQCGRADGYILXGKELEFYLRKIKSKRAK 650
LAC+ASRPGQCGRADGY+L GKELEFYLRKIK+++ K
Sbjct: 152 LACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +2
Query: 71 GNVRPYASQXKYELGRPAANTRLGPQRIHS 160
G +PY + KYELGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 38.3 bits (85), Expect = 0.17
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 25 LGLSRXHWHQRRATGGKRAPIRK 93
+G+SR +WH+RR TGGKR P K
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHK 23
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 213 bits (519), Expect = 4e-54
Identities = 104/170 (61%), Positives = 127/170 (74%), Gaps = 8/170 (4%)
Frame = +3
Query: 165 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 344
R RGGN K+RALRLDTGN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+AIV VDA
Sbjct: 48 RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDA 107
Query: 345 TPFRQWYESHYTLPLGRKK--------GAKLTEAEEAIINKKRSQKTARKYLARQRLAKV 500
PF+QWY +HY + +GRKK A+ E E A K+S RK R+ +
Sbjct: 108 APFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTL 167
Query: 501 EGALEEQFHTGRLLACVASRPGQCGRADGYILXGKELEFYLRKIKSKRAK 650
+ +EEQF +GRLLAC++SRPGQCGRADGYIL GKELEFY++K++ K+ K
Sbjct: 168 DPHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 187 bits (455), Expect = 3e-46
Identities = 85/103 (82%), Positives = 92/103 (89%)
Frame = +3
Query: 165 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 344
R RGGN KYRALRLD GNFSWGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+
Sbjct: 47 RVRGGNKKYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDS 106
Query: 345 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 473
TP+RQWYESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 107 TPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Score = 48.8 bits (111), Expect = 1e-04
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +2
Query: 71 GNVRPYASQXKYELGRPAANTRLGPQRIHS 160
G +PY + KYELGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 38.3 bits (85), Expect = 0.17
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +1
Query: 25 LGLSRXHWHQRRATGGKRAPIRK 93
+G+SR +WH+RR TGGKR P K
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHK 23
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 178 bits (433), Expect = 1e-43
Identities = 93/160 (58%), Positives = 115/160 (71%)
Frame = +3
Query: 165 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 344
R RGGN K+RALRLD+GNFSWGS+ TRKTR++DVVYNAS+NELVRTKTLVKNAIV VD
Sbjct: 47 RCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDP 106
Query: 345 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 524
TPF+ W+++HY L LG K +E +A S+K A A V L +QF
Sbjct: 107 TPFKLWFKTHYGLELG-----KSSEDPQA------SEKVA---------ALVPRTLLDQF 146
Query: 525 HTGRLLACVASRPGQCGRADGYILXGKELEFYLRKIKSKR 644
+GRLLAC++SRPGQCGR DGY+L G+EL FY R++ K+
Sbjct: 147 SSGRLLACISSRPGQCGRCDGYVLEGEELNFYRRRMDKKK 186
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 173 bits (422), Expect = 3e-42
Identities = 90/176 (51%), Positives = 117/176 (66%), Gaps = 13/176 (7%)
Frame = +3
Query: 156 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVV 335
+P R+RGGN K RALRLDTGNF+W SE + R++DVVYNA++NELVRTKTLVKN IV
Sbjct: 44 SPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVA 103
Query: 336 VDATPFRQWYESHYTLPL-GRKKGAKLTEAEE--------AIINK----KRSQKTARKYL 476
VDA PF++WY HY + L KK K A E A +K K S K R++
Sbjct: 104 VDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAADKYDVNKASPKLQREWT 163
Query: 477 ARQRLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILXGKELEFYLRKIKSKR 644
R+R +VE A+ +Q GR+LA + SRPGQ GRADG +L G EL+FYL++++ K+
Sbjct: 164 RRRRNHRVEKAIADQLREGRVLARITSRPGQSGRADGILLEGAELQFYLKRLEKKK 219
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 128 bits (310), Expect = 9e-29
Identities = 78/190 (41%), Positives = 110/190 (57%), Gaps = 30/190 (15%)
Frame = +3
Query: 165 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 344
R R G K RALRL+ GNFSW S+ T+ T+I++VVYNAS+N+ VRT TLVK AI+ +D
Sbjct: 47 RCRYGIIKRRALRLENGNFSWASQSITKGTKILNVVYNASDNDFVRTNTLVKGAIIEIDP 106
Query: 345 TPFRQWYESHYTLPLGRKKGAKLTEA-----EEAII------NKKRS------------- 452
PFR W+ Y + K E+ E+ ++ NK+++
Sbjct: 107 APFRLWFLKFYGKDIASTDYYKSLESATFKTEKKVVVPKEEENKEKTIAQQIAETQVALM 166
Query: 453 --QKTARKYLARQ----RLAKVEGALEEQFHTGRLLACVASRPGQCGRADGYILXGKELE 614
KT +K A++ + K + AL E F +GR+LAC++SRPGQ G +GYIL GKEL+
Sbjct: 167 NPSKTMQKKYAKKLEVLKNMKFDEALLEGFQSGRVLACISSRPGQTGSVEGYILEGKELD 226
Query: 615 FYLRKIKSKR 644
FY +KI K+
Sbjct: 227 FYSKKISDKK 236
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 128 bits (309), Expect = 1e-28
Identities = 58/88 (65%), Positives = 72/88 (81%)
Frame = +3
Query: 165 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 344
R RGGNTK+RALR DT N+SWGSE TRKTRI+DVVY A+NNELVRT+TLVK+AIV VDA
Sbjct: 145 RVRGGNTKWRALRFDTCNYSWGSEALTRKTRILDVVYIATNNELVRTQTLVKSAIVQVDA 204
Query: 345 TPFRQWYESHYTLPLGRKKGAKLTEAEE 428
PF+QWY +HY + +GRKK + + ++
Sbjct: 205 APFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 116 bits (280), Expect = 4e-25
Identities = 61/120 (50%), Positives = 82/120 (68%), Gaps = 9/120 (7%)
Frame = +3
Query: 318 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 476
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 477 ARQRL--AKVEGALEEQFHTGRLLACVASRPGQCGRADGYILXGKELEFYLRKIKSKRAK 650
RQ L A VE +L+E+F TGRLLAC++S+PGQ GRADGY+ GKELEF+ +K+K+K+AK
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKAKKAK 120
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 93.1 bits (221), Expect = 6e-18
Identities = 45/86 (52%), Positives = 54/86 (62%)
Frame = +3
Query: 393 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPGQC 572
R+ + T EE ++NKKRS+KT +KY R AC+ASRPGQC
Sbjct: 64 RRAPSWYTPEEEEVLNKKRSKKTQKKYDERXXXXXXXXXXXXXXXXXXXXACIASRPGQC 123
Query: 573 GRADGYILXGKELEFYLRKIKSKRAK 650
GRADGYIL GKELEFYLRKIK+K+ K
Sbjct: 124 GRADGYILEGKELEFYLRKIKAKKGK 149
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 92.7 bits (220), Expect = 8e-18
Identities = 65/159 (40%), Positives = 86/159 (54%)
Frame = +3
Query: 165 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 344
R RGG K RAL L GNFS+ S T K +I+ V +N S+NELVRT TL K +IV +D
Sbjct: 47 RVRGGGVKTRALFLSYGNFSFVSIQRTFKAKILSVAFNESSNELVRTNTLTKGSIVYLDI 106
Query: 345 TPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 524
+ TL K+ AE+ I NK L +Q
Sbjct: 107 AKTL----IYNTLIRNLNSNPKI--AEDTISNK---------------------ILIDQI 139
Query: 525 HTGRLLACVASRPGQCGRADGYILXGKELEFYLRKIKSK 641
+G++LA + SRPGQ GRADGYIL G+EL+++L+KI+ K
Sbjct: 140 LSGKILARICSRPGQSGRADGYILEGQELDYFLKKIQKK 178
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 83.0 bits (196), Expect = 6e-15
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = +3
Query: 165 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 344
R RGGN K RALRL G+F+WGS + K RI+ VVYN+++NELVRT TLVK +V +D+
Sbjct: 56 RCRGGNIKRRALRLSHGSFAWGSADISHKARILQVVYNSTSNELVRTNTLVKGCVVQIDS 115
Query: 345 TPFR 356
PF+
Sbjct: 116 APFK 119
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 516 EQFHTGRLLACVASRPGQCGRADGYILXGKELEFYLRKIKSK 641
+Q +LA ++SRPGQ G ADGYIL G EL FY +K+ K
Sbjct: 133 DQIRGDHILARISSRPGQVGTADGYILEGPELLFYQKKLAPK 174
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 75.8 bits (178), Expect = 9e-13
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +3
Query: 156 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVV 335
TP R RGGN KY+ALRLD G+F + + R +++ VVY+ S+NELVRT TL K+++V
Sbjct: 44 TPVRVRGGNRKYKALRLDMGHFKFITTGKFRMAKLLQVVYHPSSNELVRTNTLTKSSVVK 103
Query: 336 VDATPFR 356
+ A PF+
Sbjct: 104 ISAEPFK 110
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/48 (47%), Positives = 29/48 (60%)
Frame = +3
Query: 498 VEGALEEQFHTGRLLACVASRPGQCGRADGYILXGKELEFYLRKIKSK 641
V+ +L E F G L A + SRPGQ G A G++L G EL+FY K K
Sbjct: 120 VDPSLHESFEKGHLYAIITSRPGQVGMAQGHVLQGDELKFYADKFNKK 167
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 71.3 bits (167), Expect = 2e-11
Identities = 40/82 (48%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +3
Query: 393 RKKGAKLTEAEEAIINKKRSQKTARKYLAR-QRLAKVEGALEEQFHTGRLLACVASRPGQ 569
R + + E I K R +K AR KVE ALE+QF GRL A V+SRPGQ
Sbjct: 59 RLESGNFSWGSEGIARKVRVIVVEKKQAARFAAQGKVEPALEKQFEAGRLYAVVSSRPGQ 118
Query: 570 CGRADGYILXGKELEFYLRKIK 635
GR DGYIL G+EL FY R I+
Sbjct: 119 SGRVDGYILEGEELAFYQRAIR 140
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +3
Query: 165 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 269
R+RGGN K+R LRL++GNFSWGSE RK R+I V
Sbjct: 47 RTRGGNQKFRGLRLESGNFSWGSEGIARKVRVIVV 81
Score = 33.5 bits (73), Expect = 4.9
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 86 YASQXKYELGRPAANTRLGPQRIH 157
Y + +E GR ANTR+GP+RIH
Sbjct: 21 YRKKRAFEKGRQPANTRIGPKRIH 44
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 61.3 bits (142), Expect = 2e-08
Identities = 39/92 (42%), Positives = 54/92 (58%)
Frame = +3
Query: 291 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 470
ELVRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 471 YLARQRLAKVEGALEEQFHTGRLLACVASRPG 566
RQ+ K++ +EEQF +GRLLA ++S PG
Sbjct: 79 LEKRQQDHKLDPHIEEQFGSGRLLAAISSYPG 110
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 58.4 bits (135), Expect = 2e-07
Identities = 24/63 (38%), Positives = 42/63 (66%)
Frame = +3
Query: 165 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 344
R RGGN K++A+ L G+F W + ++ ++I+ V+YN +N +LV+ + L K I+ +D+
Sbjct: 41 RVRGGNFKFKAISLGKGSFQWKTMQLSKNSKILSVLYNQANLKLVQKRNLSKGTIIKIDS 100
Query: 345 TPF 353
PF
Sbjct: 101 MPF 103
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 42.7 bits (96), Expect = 0.008
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +3
Query: 165 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 332
R+ GGN K RALRL+ S + T+KT+I V N+++ VR K L K AI+
Sbjct: 45 RTFGGNQKVRALRLEYATVSNPATGETKKTKIEAVEANSADPNYVRRKLLTKGAII 100
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 37.5 bits (83), Expect = 0.30
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +3
Query: 231 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 395
SE ST+ T ++ + AS EL KTL K A+ ++D PF W + L R
Sbjct: 174 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 233
Query: 396 KKGAKLTEAEEAIINKKRS 452
G L A+E +INK+ +
Sbjct: 234 MSGDLLNYAQE-LINKQNT 251
>UniRef50_Q3SAD8 Cluster: Putative uncharacterized protein; n=1;
uncultured euryarchaeote Alv-FOS1|Rep: Putative
uncharacterized protein - uncultured euryarchaeote
Alv-FOS1
Length = 484
Score = 35.1 bits (77), Expect = 1.6
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +3
Query: 135 GSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 314
GS L V+ ++ G + + L N +W + R + + V N + N R T+
Sbjct: 221 GSKLLVNATVKNMGTSPGWANLTFSIDNHTWSNNIYVRSEKTVHVALNVTRNGTFRLTTV 280
Query: 315 VKNAI 329
VKN I
Sbjct: 281 VKNDI 285
>UniRef50_A5ASW3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 738
Score = 33.9 bits (74), Expect = 3.7
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +3
Query: 393 RKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRP 563
+K+G K E I + RK RQ+ K++ +EEQF +GRLLA ++S P
Sbjct: 273 KKEGEKGDGPVEEI---NKGNHVVRKLEKRQQDHKLDPHIEEQFGSGRLLAAISSYP 326
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 33.9 bits (74), Expect = 3.7
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 165 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 332
RS GGN+K+ LR D N + +TRK +I V N+++ V+ + + ++
Sbjct: 46 RSYGGNSKFALLRCDYANVYNPKDKTTRKVKINTVKENSADPHYVQRNIMNRGTVI 101
>UniRef50_UPI0000F2B19F Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +3
Query: 414 TEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQF 524
T EE I+NKK S+K +KY ++ AK+ L E F
Sbjct: 105 TPEEEEILNKKHSKKIQKKYEEWKKKAKISLLLREHF 141
>UniRef50_Q8TN82 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 90
Score = 33.1 bits (72), Expect = 6.5
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 363 YESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTA-RKYLARQRLAKVEGALEE 518
Y + +TL R + A EA E ++ K +K A K LA+ L K+EG LEE
Sbjct: 31 YRNIWTLNGSRNRSATSKEACEKLLAKNCLRKIACEKLLAKNCLRKIEGLLEE 83
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 8.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 327 IVVVDATPFRQWYESHYTLPLGRKK 401
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 8.6
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +3
Query: 342 ATPFRQWYESHYTLPLGRKKGAKLTEAE 425
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,911,477
Number of Sequences: 1657284
Number of extensions: 12325742
Number of successful extensions: 33842
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 32687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33825
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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