Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_J11
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF078786-1|AAY43998.1| 102|Caenorhabditis elegans Hypothetical ... 61 8e-10
Z49936-5|CAE47467.1| 801|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical pr... 38 0.011
AY834228-1|AAV91314.1| 589|Caenorhabditis elegans Toll and inte... 38 0.011
AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and inte... 38 0.011
AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and inte... 38 0.011
AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical ... 29 3.8
U41272-9|AAA82452.4| 1256|Caenorhabditis elegans Prion-like-(q/n... 29 5.0
AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical ... 28 8.8
AF068713-1|AAC17794.1| 206|Caenorhabditis elegans Hypothetical ... 28 8.8
>AF078786-1|AAY43998.1| 102|Caenorhabditis elegans Hypothetical
protein M01G5.6 protein.
Length = 102
Score = 61.3 bits (142), Expect = 8e-10
Identities = 29/81 (35%), Positives = 45/81 (55%)
Frame = +2
Query: 149 KAIYLWTEADVQKWLRRHCSDYYHMYWESFHEHDITGRALVRINDNTLLRMGINNKDHRE 328
+ IY W+ DV +WLRR + Y F H++TGR LV ++D+ L +G+ D R+
Sbjct: 15 RPIYFWSANDVDQWLRRKRPRFALKYAHFFLRHNVTGRVLVEMSDDDLREIGVETDDERQ 74
Query: 329 AIWREILKLRLKADIVEIRDL 391
+ EI K +L +D+ E L
Sbjct: 75 DLLLEIKKEKLYSDLDEFSKL 95
>Z49936-5|CAE47467.1| 801|Caenorhabditis elegans Hypothetical
protein F13B10.1e protein.
Length = 801
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 164 WTEADVQKWLRRHCSDYYHMYWESFHEHDITGRALVRINDNTLLR-MGINNKDHREAIWR 340
WT ADVQ W+++ + Y E F + + G L+++ +N L +G+ + HR+ R
Sbjct: 431 WTCADVQYWVKK---IGFEEYVEKFAKQMVDGDLLLQLTENDLKHDVGMISGLHRKRFLR 487
Query: 341 EILKLRLKAD 370
E+ L++ AD
Sbjct: 488 ELQTLKVAAD 497
>Z49936-3|CAD90174.1| 1000|Caenorhabditis elegans Hypothetical
protein F13B10.1c protein.
Length = 1000
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 164 WTEADVQKWLRRHCSDYYHMYWESFHEHDITGRALVRINDNTLLR-MGINNKDHREAIWR 340
WT ADVQ W+++ + Y E F + + G L+++ +N L +G+ + HR+ R
Sbjct: 614 WTCADVQYWVKK---IGFEEYVEKFAKQMVDGDLLLQLTENDLKHDVGMISGLHRKRFLR 670
Query: 341 EILKLRLKAD 370
E+ L++ AD
Sbjct: 671 ELQTLKVAAD 680
>Z49936-2|CAA90181.1| 586|Caenorhabditis elegans Hypothetical
protein F13B10.1b protein.
Length = 586
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 164 WTEADVQKWLRRHCSDYYHMYWESFHEHDITGRALVRINDNTLLR-MGINNKDHREAIWR 340
WT ADVQ W+++ + Y E F + + G L+++ +N L +G+ + HR+ R
Sbjct: 219 WTCADVQYWVKK---IGFEEYVEKFAKQMVDGDLLLQLTENDLKHDVGMISGLHRKRFLR 275
Query: 341 EILKLRLKAD 370
E+ L++ AD
Sbjct: 276 ELQTLKVAAD 285
>Z49936-1|CAA90182.1| 930|Caenorhabditis elegans Hypothetical
protein F13B10.1a protein.
Length = 930
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 164 WTEADVQKWLRRHCSDYYHMYWESFHEHDITGRALVRINDNTLLR-MGINNKDHREAIWR 340
WT ADVQ W+++ + Y E F + + G L+++ +N L +G+ + HR+ R
Sbjct: 560 WTCADVQYWVKK---IGFEEYVEKFAKQMVDGDLLLQLTENDLKHDVGMISGLHRKRFLR 616
Query: 341 EILKLRLKAD 370
E+ L++ AD
Sbjct: 617 ELQTLKVAAD 626
>AY834228-1|AAV91314.1| 589|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform f protein.
Length = 589
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 164 WTEADVQKWLRRHCSDYYHMYWESFHEHDITGRALVRINDNTLLR-MGINNKDHREAIWR 340
WT ADVQ W+++ + Y E F + + G L+++ +N L +G+ + HR+ R
Sbjct: 219 WTCADVQYWVKK---IGFEEYVEKFAKQMVDGDLLLQLTENDLKHDVGMISGLHRKRFLR 275
Query: 341 EILKLRLKAD 370
E+ L++ AD
Sbjct: 276 ELQTLKVAAD 285
>AY834227-1|AAV91313.1| 984|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform c protein.
Length = 984
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 164 WTEADVQKWLRRHCSDYYHMYWESFHEHDITGRALVRINDNTLLR-MGINNKDHREAIWR 340
WT ADVQ W+++ + Y E F + + G L+++ +N L +G+ + HR+ R
Sbjct: 614 WTCADVQYWVKK---IGFEEYVEKFAKQMVDGDLLLQLTENDLKHDVGMISGLHRKRFLR 670
Query: 341 EILKLRLKAD 370
E+ L++ AD
Sbjct: 671 ELQTLKVAAD 680
>AY834226-1|AAV91312.1| 931|Caenorhabditis elegans Toll and
interleukin 1 receptordomain protein isoform a protein.
Length = 931
Score = 37.5 bits (83), Expect = 0.011
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 164 WTEADVQKWLRRHCSDYYHMYWESFHEHDITGRALVRINDNTLLR-MGINNKDHREAIWR 340
WT ADVQ W+++ + Y E F + + G L+++ +N L +G+ + HR+ R
Sbjct: 561 WTCADVQYWVKK---IGFEEYVEKFAKQMVDGDLLLQLTENDLKHDVGMISGLHRKRFLR 617
Query: 341 EILKLRLKAD 370
E+ L++ AD
Sbjct: 618 ELQTLKVAAD 627
>AF078788-1|AAC26965.2| 629|Caenorhabditis elegans Hypothetical
protein ZC190.4 protein.
Length = 629
Score = 29.1 bits (62), Expect = 3.8
Identities = 25/75 (33%), Positives = 39/75 (52%)
Frame = +2
Query: 176 DVQKWLRRHCSDYYHMYWESFHEHDITGRALVRINDNTLLRMGINNKDHREAIWREILKL 355
D+ WL++ H Y F D+T R L+ +NDN L RM + N R+ I + I KL
Sbjct: 193 DLGYWLKKL---RLHKYAPLFQ--DMTYRQLLSLNDNVLERMKVTN-GARKKIAQSIEKL 246
Query: 356 RLKADIVEIRDLERR 400
+ + +R LE++
Sbjct: 247 YERPAL--LRSLEQK 259
>U41272-9|AAA82452.4| 1256|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 62
protein.
Length = 1256
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 464 QLSSVPQLEAPPVTSHN*NSYAYVLNHGSRLCQLS 360
Q+ + ++ PP T H+ NS + H S+L QLS
Sbjct: 223 QVPHLSHMDQPPPTQHSMNSISQSQQHPSQLSQLS 257
>AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical
protein T10D4.6 protein.
Length = 796
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +2
Query: 83 TLKMVEXPNLNSSKPKAKTTRPKAI--YLWTEADVQKWLRRHCSDYYHMYWESFHEHDIT 256
T + VE L + K T ++ WT+ DV W ++ YW++ D++
Sbjct: 692 TPQKVEHKELKPASKKLHTPPSGSLDWKTWTKPDVIAWAKQFLDQ---KYWDTISLSDMS 748
Query: 257 GRALVRI 277
GR L I
Sbjct: 749 GRDLAEI 755
>AF068713-1|AAC17794.1| 206|Caenorhabditis elegans Hypothetical
protein T24A6.7 protein.
Length = 206
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 170 EADVQKWLRRHCSDYYHMYWESF--HEHDITGRALVRINDNTLLRMG 304
E DV+K + +CS+ Y MY ++ + +I G+ L + + R+G
Sbjct: 39 ENDVEKNVNFNCSEQYFMYHKALLVGDSEIAGKILKETDPRKMKRLG 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,943,833
Number of Sequences: 27780
Number of extensions: 347036
Number of successful extensions: 801
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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