Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_J09
(787 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein. 97 8e-20
M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl ... 96 1e-19
D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein. 96 1e-19
BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate sy... 96 1e-19
AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate sy... 96 1e-19
Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate sy... 85 2e-16
BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein. 66 1e-10
BC031068-1|AAH31068.1| 429|Homo sapiens AADAT protein protein. 32 2.0
AF481738-1|AAM09683.1| 425|Homo sapiens alpha-aminoadipate amin... 32 2.0
AF097994-1|AAF04623.1| 425|Homo sapiens L-kynurenine/alpha-amin... 32 2.0
AC084866-3|AAY41030.1| 425|Homo sapiens unknown protein. 32 2.0
AK127273-1|BAC86911.1| 182|Homo sapiens protein ( Homo sapiens ... 31 4.7
AB051466-1|BAB21770.1| 1536|Homo sapiens KIAA1679 protein protein. 31 6.2
BC067768-1|AAH67768.1| 300|Homo sapiens GGPS1 protein protein. 30 8.2
BC005252-1|AAH05252.1| 300|Homo sapiens geranylgeranyl diphosph... 30 8.2
AL391994-8|CAI13753.1| 300|Homo sapiens geranylgeranyl diphosph... 30 8.2
AF125394-1|AAD43050.1| 300|Homo sapiens gerannylgeranyl pyropho... 30 8.2
AF057698-1|AAG45581.1| 300|Homo sapiens geranylgeranyl pyrophos... 30 8.2
AB019036-1|BAA77251.1| 300|Homo sapiens geranylgeranyl pyrophos... 30 8.2
AB017971-1|BAA75909.1| 300|Homo sapiens geranylgeranyl diphosph... 30 8.2
AB016043-1|BAA76511.1| 300|Homo sapiens GGPP synthase protein. 30 8.2
>J05262-1|AAA52423.1| 353|Homo sapiens FDPS protein.
Length = 353
Score = 96.7 bits (230), Expect = 8e-20
Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Frame = +1
Query: 403 VSKDQSREFMAVFPDIVRDLTETGK-HIDVPEASKWLAKLLQYNVPNGKKNRGLATILAY 579
V + ++F+ F IVR LTE H ++ +A L ++L+YN GK NRGL ++A+
Sbjct: 9 VYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAF 68
Query: 580 KMLEKKENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNG 759
+ L + +++ A +GWCVE+ L+ +DIM+ + RRG CW+++P VGL+
Sbjct: 69 RELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQTCWYQKPGVGLDA 128
Query: 760 INDAALI 780
INDA L+
Sbjct: 129 INDANLL 135
>M29863-1|AAA35820.1| 346|Homo sapiens protein ( Human farnesyl
pyrophosphate synthetase mRNA (hpt807), 3' end. ).
Length = 346
Score = 95.9 bits (228), Expect = 1e-19
Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Frame = +1
Query: 403 VSKDQSREFMAVFPDIVRDLTETGK-HIDVPEASKWLAKLLQYNVPNGKKNRGLATILAY 579
V + ++F+ F IVR LTE H ++ +A L ++L+YN GK NRGL ++A+
Sbjct: 2 VYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAF 61
Query: 580 KMLEKKENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNG 759
+ L + +++ A +GWCVE+ L+ +DIM+ + RRG CW+++P VGL+
Sbjct: 62 RELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDA 121
Query: 760 INDAALI 780
INDA L+
Sbjct: 122 INDANLL 128
>D14697-1|BAA03523.2| 420|Homo sapiens KIAA1293 protein.
Length = 420
Score = 95.9 bits (228), Expect = 1e-19
Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Frame = +1
Query: 403 VSKDQSREFMAVFPDIVRDLTETGK-HIDVPEASKWLAKLLQYNVPNGKKNRGLATILAY 579
V + ++F+ F IVR LTE H ++ +A L ++L+YN GK NRGL ++A+
Sbjct: 76 VYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAF 135
Query: 580 KMLEKKENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNG 759
+ L + +++ A +GWCVE+ L+ +DIM+ + RRG CW+++P VGL+
Sbjct: 136 RELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDA 195
Query: 760 INDAALI 780
INDA L+
Sbjct: 196 INDANLL 202
>BC010004-1|AAH10004.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 95.9 bits (228), Expect = 1e-19
Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Frame = +1
Query: 403 VSKDQSREFMAVFPDIVRDLTETGK-HIDVPEASKWLAKLLQYNVPNGKKNRGLATILAY 579
V + ++F+ F IVR LTE H ++ +A L ++L+YN GK NRGL ++A+
Sbjct: 75 VYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAF 134
Query: 580 KMLEKKENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNG 759
+ L + +++ A +GWCVE+ L+ +DIM+ + RRG CW+++P VGL+
Sbjct: 135 RELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDA 194
Query: 760 INDAALI 780
INDA L+
Sbjct: 195 INDANLL 201
>AL139410-1|CAI12715.1| 419|Homo sapiens farnesyl diphosphate
synthase (farnesyl pyrophosphate synthetase,
dimethylallyl protein.
Length = 419
Score = 95.9 bits (228), Expect = 1e-19
Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Frame = +1
Query: 403 VSKDQSREFMAVFPDIVRDLTETGK-HIDVPEASKWLAKLLQYNVPNGKKNRGLATILAY 579
V + ++F+ F IVR LTE H ++ +A L ++L+YN GK NRGL ++A+
Sbjct: 75 VYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAF 134
Query: 580 KMLEKKENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNG 759
+ L + +++ A +GWCVE+ L+ +DIM+ + RRG CW+++P VGL+
Sbjct: 135 RELVEPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDA 194
Query: 760 INDAALI 780
INDA L+
Sbjct: 195 INDANLL 201
>Z47055-1|CAA87327.1| 348|Homo sapiens farnesyl pyrophosphate
synthetase like-4 protein.
Length = 348
Score = 85.4 bits (202), Expect = 2e-16
Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 1/127 (0%)
Frame = +1
Query: 403 VSKDQSREFMAVFPDIVRDLTETGK-HIDVPEASKWLAKLLQYNVPNGKKNRGLATILAY 579
V + ++F+ F IVR TE H ++ +A L ++L+YN GK NR L +A+
Sbjct: 4 VYAQEKQDFVQHFSQIVRVPTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRRLTVAVAF 63
Query: 580 KMLEKKENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNG 759
+ L +++ A +GWCVE+ L+ +DIM+ + RRG CW+++P VGL+
Sbjct: 64 RELVDPRKQDADSLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGLDA 123
Query: 760 INDAALI 780
I+DA L+
Sbjct: 124 IDDANLL 130
>BC050292-1|AAH50292.1| 298|Homo sapiens LOC619190 protein protein.
Length = 298
Score = 66.1 bits (154), Expect = 1e-10
Identities = 30/101 (29%), Positives = 59/101 (58%)
Frame = +1
Query: 478 HIDVPEASKWLAKLLQYNVPNGKKNRGLATILAYKMLEKKENLTPENILLANVMGWCVEM 657
H + +A+ L ++L+YN GK +RGL ++A++ L + L +++ A +GW ++
Sbjct: 3 HPETGDATARLKEVLEYNAIGGKYHRGLMVLVAFRELVEPRKLDADSLQWAPTVGWYAQL 62
Query: 658 FHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNGINDAALI 780
L+ +DIM+ + +G W+++ +GL+ INDA L+
Sbjct: 63 LQAFFLVADDIMDSSLTCQGQISWYQKLGMGLDAINDAILL 103
>BC031068-1|AAH31068.1| 429|Homo sapiens AADAT protein protein.
Length = 429
Score = 32.3 bits (70), Expect = 2.0
Identities = 24/77 (31%), Positives = 33/77 (42%)
Frame = +1
Query: 307 TGPKRLLKLQKYHRFLSTLTPQEMPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHID 486
TGPK L++ H +STL P + + FMA D V D K
Sbjct: 279 TGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMA-HVDRVIDFYSNQKDAI 337
Query: 487 VPEASKWLAKLLQYNVP 537
+ A KWL L +++VP
Sbjct: 338 LAAADKWLTGLAEWHVP 354
>AF481738-1|AAM09683.1| 425|Homo sapiens alpha-aminoadipate
aminotransferase protein.
Length = 425
Score = 32.3 bits (70), Expect = 2.0
Identities = 24/77 (31%), Positives = 33/77 (42%)
Frame = +1
Query: 307 TGPKRLLKLQKYHRFLSTLTPQEMPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHID 486
TGPK L++ H +STL P + + FMA D V D K
Sbjct: 275 TGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMA-HVDRVIDFYSNQKDAI 333
Query: 487 VPEASKWLAKLLQYNVP 537
+ A KWL L +++VP
Sbjct: 334 LAAADKWLTGLAEWHVP 350
>AF097994-1|AAF04623.1| 425|Homo sapiens
L-kynurenine/alpha-aminoadipate aminotransferase
protein.
Length = 425
Score = 32.3 bits (70), Expect = 2.0
Identities = 24/77 (31%), Positives = 33/77 (42%)
Frame = +1
Query: 307 TGPKRLLKLQKYHRFLSTLTPQEMPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHID 486
TGPK L++ H +STL P + + FMA D V D K
Sbjct: 275 TGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMA-HVDRVIDFYSNQKDAI 333
Query: 487 VPEASKWLAKLLQYNVP 537
+ A KWL L +++VP
Sbjct: 334 LAAADKWLTGLAEWHVP 350
>AC084866-3|AAY41030.1| 425|Homo sapiens unknown protein.
Length = 425
Score = 32.3 bits (70), Expect = 2.0
Identities = 24/77 (31%), Positives = 33/77 (42%)
Frame = +1
Query: 307 TGPKRLLKLQKYHRFLSTLTPQEMPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHID 486
TGPK L++ H +STL P + + FMA D V D K
Sbjct: 275 TGPKPLIERVILHIQVSTLHPSTFNQLMISQLLHEWGEEGFMA-HVDRVIDFYSNQKDAI 333
Query: 487 VPEASKWLAKLLQYNVP 537
+ A KWL L +++VP
Sbjct: 334 LAAADKWLTGLAEWHVP 350
>AK127273-1|BAC86911.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ45340 fis, clone BRHIP3008714. ).
Length = 182
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 279 GEQVATG*GNRTEET-AEAAKISQIPVDPDSSGNADGYPRTGRFQGPVPGVHGCLSGHRQ 455
G +A G G + E + ++ V P +A G R QGPV VHG G
Sbjct: 98 GPHIAAGRGQEGDRVPGEHSHRARFHVPPHKHADATGGLAGRRHQGPVGQVHGLGRGFLA 157
Query: 456 GSH 464
G+H
Sbjct: 158 GAH 160
>AB051466-1|BAB21770.1| 1536|Homo sapiens KIAA1679 protein protein.
Length = 1536
Score = 30.7 bits (66), Expect = 6.2
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 401 PFP-RTSPGSSWLSFRTSSGISLRLASTLMFRKPANGWLSC 520
PF + S SSW S +S GI +R+ S + KP NG C
Sbjct: 926 PFDCKLSDWSSWGSCSSSCGIGVRIRSKWLKEKPYNGGRPC 966
>BC067768-1|AAH67768.1| 300|Homo sapiens GGPS1 protein protein.
Length = 300
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 652 EMFHTHQLLLNDIMEGTTMRRGVPCWH 732
EM H LL++DI + + +RRG P H
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAH 80
>BC005252-1|AAH05252.1| 300|Homo sapiens geranylgeranyl diphosphate
synthase 1 protein.
Length = 300
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 652 EMFHTHQLLLNDIMEGTTMRRGVPCWH 732
EM H LL++DI + + +RRG P H
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAH 80
>AL391994-8|CAI13753.1| 300|Homo sapiens geranylgeranyl diphosphate
synthase 1 protein.
Length = 300
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 652 EMFHTHQLLLNDIMEGTTMRRGVPCWH 732
EM H LL++DI + + +RRG P H
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAH 80
>AF125394-1|AAD43050.1| 300|Homo sapiens gerannylgeranyl
pyrophosphate synthase protein.
Length = 300
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 652 EMFHTHQLLLNDIMEGTTMRRGVPCWH 732
EM H LL++DI + + +RRG P H
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAH 80
>AF057698-1|AAG45581.1| 300|Homo sapiens geranylgeranyl
pyrophosphate synthetase protein.
Length = 300
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 652 EMFHTHQLLLNDIMEGTTMRRGVPCWH 732
EM H LL++DI + + +RRG P H
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAH 80
>AB019036-1|BAA77251.1| 300|Homo sapiens geranylgeranyl
pyrophosphate synthase protein.
Length = 300
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 652 EMFHTHQLLLNDIMEGTTMRRGVPCWH 732
EM H LL++DI + + +RRG P H
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAH 80
>AB017971-1|BAA75909.1| 300|Homo sapiens geranylgeranyl diphosphate
synthase protein.
Length = 300
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 652 EMFHTHQLLLNDIMEGTTMRRGVPCWH 732
EM H LL++DI + + +RRG P H
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAH 80
>AB016043-1|BAA76511.1| 300|Homo sapiens GGPP synthase protein.
Length = 300
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 652 EMFHTHQLLLNDIMEGTTMRRGVPCWH 732
EM H LL++DI + + +RRG P H
Sbjct: 54 EMLHNASLLIDDIEDNSKLRRGFPVAH 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.130 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,687,870
Number of Sequences: 237096
Number of extensions: 2925687
Number of successful extensions: 8115
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8110
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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