SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_J08
         (786 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC015970-1|AAH15970.1|   99|Homo sapiens LOC84661 protein protein.     97   6e-20
AF226998-1|AAK00640.1|   99|Homo sapiens dpy-30-like protein pro...    97   6e-20
AK057426-1|BAB71480.1|  723|Homo sapiens protein ( Homo sapiens ...    51   4e-06
Y14992-1|CAA75226.1|  212|Homo sapiens nucleoside-diphosphate ki...    44   5e-04
U90450-1|AAC69440.1|  212|Homo sapiens inhibitor of p53-induced ...    44   5e-04
BC026182-1|AAH26182.1|  212|Homo sapiens non-metastatic cells 5,...    44   5e-04
AF067724-1|AAC64358.1|  212|Homo sapiens nm23-H5 protein.              44   5e-04
BC019250-1|AAH19250.1|  177|Homo sapiens DPY30 domain containing...    37   0.095
AL359195-8|CAI13702.1|   80|Homo sapiens DPY30 domain containing...    37   0.095
AL359195-7|CAI13701.1|  153|Homo sapiens DPY30 domain containing...    37   0.095
AL359195-6|CAI13699.1|  177|Homo sapiens DPY30 domain containing...    37   0.095
AK125908-1|BAC86339.1|  184|Homo sapiens protein ( Homo sapiens ...    37   0.095
BC007374-1|AAH07374.1|  177|Homo sapiens DYDC2 protein protein.        33   1.2  
AL359195-10|CAI13704.1|  177|Homo sapiens DPY30 domain containin...    33   1.2  
AL359195-9|CAI13703.1|  126|Homo sapiens DPY30 domain containing...    33   1.2  
AL359195-5|CAI13698.1|  191|Homo sapiens DPY30 domain containing...    33   1.2  
AK093378-1|BAC04148.1|  177|Homo sapiens protein ( Homo sapiens ...    33   1.2  
BC032725-1|AAH32725.1|  234|Homo sapiens fibronectin type III do...    32   2.7  
AY358136-1|AAQ88503.1|  234|Homo sapiens PSGC6389 protein.             32   2.7  
AK026015-1|BAB15321.1|  234|Homo sapiens protein ( Homo sapiens ...    32   2.7  
AC074117-2|AAY14849.1|  234|Homo sapiens unknown protein.              32   2.7  
AB065580-1|BAC05810.1|  346|Homo sapiens seven transmembrane hel...    31   4.7  

>BC015970-1|AAH15970.1|   99|Homo sapiens LOC84661 protein protein.
          Length = 99

 Score = 97.1 bits (231), Expect = 6e-20
 Identities = 52/99 (52%), Positives = 67/99 (67%)
 Frame = +1

Query: 91  QPMSASSTQLNHNKAAQSTPQIPASVKQIILMEKANEANANRKSRIDLNALPTRQYLDQT 270
           + M    TQ+  N    S   +  +V++I+  EK N A  + K ++DL +LPTR YLDQT
Sbjct: 4   EQMLEGQTQVAENP--HSEYGLTDNVERIVENEKIN-AEKSSKQKVDLQSLPTRAYLDQT 60

Query: 271 VVPILLQGLSALAKERPPDPINYLAAYLLKNKTTFELAN 387
           VVPILLQGL+ LAKERPP+PI +LA+YLLKNK  FE  N
Sbjct: 61  VVPILLQGLAVLAKERPPNPIEFLASYLLKNKAQFEDRN 99


>AF226998-1|AAK00640.1|   99|Homo sapiens dpy-30-like protein
           protein.
          Length = 99

 Score = 97.1 bits (231), Expect = 6e-20
 Identities = 52/99 (52%), Positives = 67/99 (67%)
 Frame = +1

Query: 91  QPMSASSTQLNHNKAAQSTPQIPASVKQIILMEKANEANANRKSRIDLNALPTRQYLDQT 270
           + M    TQ+  N    S   +  +V++I+  EK N A  + K ++DL +LPTR YLDQT
Sbjct: 4   EQMLEGQTQVAENP--HSEYGLTDNVERIVENEKIN-AEKSSKQKVDLQSLPTRAYLDQT 60

Query: 271 VVPILLQGLSALAKERPPDPINYLAAYLLKNKTTFELAN 387
           VVPILLQGL+ LAKERPP+PI +LA+YLLKNK  FE  N
Sbjct: 61  VVPILLQGLAVLAKERPPNPIEFLASYLLKNKAQFEDRN 99


>AK057426-1|BAB71480.1|  723|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32864 fis, clone TESTI2003625. ).
          Length = 723

 Score = 51.2 bits (117), Expect = 4e-06
 Identities = 21/59 (35%), Positives = 34/59 (57%)
 Frame = +1

Query: 187 EKANEANANRKSRIDLNALPTRQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKN 363
           ++  E     +  ++  ++P R YL   V+P L+QGL+     RP DP+++LA YL KN
Sbjct: 660 KRLEEVKREERELLEAQSIPLRNYLMTYVMPTLIQGLNECCNVRPEDPVDFLAEYLFKN 718


>Y14992-1|CAA75226.1|  212|Homo sapiens nucleoside-diphosphate
           kinase protein.
          Length = 212

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 18/38 (47%), Positives = 29/38 (76%)
 Frame = +1

Query: 250 RQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKN 363
           + YL+  ++P LL+GL+ L K++P DP+ +LA +LLKN
Sbjct: 158 KDYLNLHIMPTLLEGLTELCKQKPADPLIWLADWLLKN 195


>U90450-1|AAC69440.1|  212|Homo sapiens inhibitor of p53-induced
           apoptosis-beta protein.
          Length = 212

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 18/38 (47%), Positives = 29/38 (76%)
 Frame = +1

Query: 250 RQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKN 363
           + YL+  ++P LL+GL+ L K++P DP+ +LA +LLKN
Sbjct: 158 KDYLNLHIMPTLLEGLTELCKQKPADPLIWLADWLLKN 195


>BC026182-1|AAH26182.1|  212|Homo sapiens non-metastatic cells 5,
           protein expressed in (nucleoside-diphosphate kinase)
           protein.
          Length = 212

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 18/38 (47%), Positives = 29/38 (76%)
 Frame = +1

Query: 250 RQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKN 363
           + YL+  ++P LL+GL+ L K++P DP+ +LA +LLKN
Sbjct: 158 KDYLNLHIMPTLLEGLTELCKQKPADPLIWLADWLLKN 195


>AF067724-1|AAC64358.1|  212|Homo sapiens nm23-H5 protein.
          Length = 212

 Score = 44.4 bits (100), Expect = 5e-04
 Identities = 18/38 (47%), Positives = 29/38 (76%)
 Frame = +1

Query: 250 RQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKN 363
           + YL+  ++P LL+GL+ L K++P DP+ +LA +LLKN
Sbjct: 158 KDYLNLHIMPTLLEGLTELCKQKPADPLIWLADWLLKN 195


>BC019250-1|AAH19250.1|  177|Homo sapiens DPY30 domain containing 1
           protein.
          Length = 177

 Score = 36.7 bits (81), Expect = 0.095
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +1

Query: 256 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNK 366
           YL + +   L QGL+ +A+ RP DPI YLA ++ K K
Sbjct: 5   YLQKHLGACLTQGLAEVARVRPVDPIEYLALWIYKYK 41


>AL359195-8|CAI13702.1|   80|Homo sapiens DPY30 domain containing 1
           protein.
          Length = 80

 Score = 36.7 bits (81), Expect = 0.095
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +1

Query: 256 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNK 366
           YL + +   L QGL+ +A+ RP DPI YLA ++ K K
Sbjct: 5   YLQKHLGACLTQGLAEVARVRPVDPIEYLALWIYKYK 41


>AL359195-7|CAI13701.1|  153|Homo sapiens DPY30 domain containing 1
           protein.
          Length = 153

 Score = 36.7 bits (81), Expect = 0.095
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +1

Query: 256 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNK 366
           YL + +   L QGL+ +A+ RP DPI YLA ++ K K
Sbjct: 5   YLQKHLGACLTQGLAEVARVRPVDPIEYLALWIYKYK 41


>AL359195-6|CAI13699.1|  177|Homo sapiens DPY30 domain containing 1
           protein.
          Length = 177

 Score = 36.7 bits (81), Expect = 0.095
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +1

Query: 256 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNK 366
           YL + +   L QGL+ +A+ RP DPI YLA ++ K K
Sbjct: 5   YLQKHLGACLTQGLAEVARVRPVDPIEYLALWIYKYK 41


>AK125908-1|BAC86339.1|  184|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43920 fis, clone TESTI4012086. ).
          Length = 184

 Score = 36.7 bits (81), Expect = 0.095
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +1

Query: 256 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNK 366
           YL + +   L QGL+ +A+ RP DPI YLA ++ K K
Sbjct: 5   YLQKHLGACLTQGLAEVARVRPVDPIEYLALWIYKYK 41


>BC007374-1|AAH07374.1|  177|Homo sapiens DYDC2 protein protein.
          Length = 177

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 256 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 372
           YL +     L Q L+ +AK RP DPI YLA +L   + T
Sbjct: 5   YLKRCFGNCLAQALAEVAKVRPSDPIEYLAHWLYHYRKT 43


>AL359195-10|CAI13704.1|  177|Homo sapiens DPY30 domain containing 2
           protein.
          Length = 177

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 256 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 372
           YL +     L Q L+ +AK RP DPI YLA +L   + T
Sbjct: 5   YLKRCFGNCLAQALAEVAKVRPSDPIEYLAHWLYHYRKT 43


>AL359195-9|CAI13703.1|  126|Homo sapiens DPY30 domain containing 2
           protein.
          Length = 126

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 256 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 372
           YL +     L Q L+ +AK RP DPI YLA +L   + T
Sbjct: 5   YLKRCFGNCLAQALAEVAKVRPSDPIEYLAHWLYHYRKT 43


>AL359195-5|CAI13698.1|  191|Homo sapiens DPY30 domain containing 2
           protein.
          Length = 191

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 256 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 372
           YL +     L Q L+ +AK RP DPI YLA +L   + T
Sbjct: 19  YLKRCFGNCLAQALAEVAKVRPSDPIEYLAHWLYHYRKT 57


>AK093378-1|BAC04148.1|  177|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36059 fis, clone TESTI2018482. ).
          Length = 177

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 256 YLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 372
           YL +     L Q L+ +AK RP DPI YLA +L   + T
Sbjct: 5   YLKRCFGNCLAQALAEVAKVRPSDPIEYLAHWLYHYRKT 43


>BC032725-1|AAH32725.1|  234|Homo sapiens fibronectin type III
           domain containing 4 protein.
          Length = 234

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 241 LPTRQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 372
           +P   YL  TV+ ++   L  +  +RPP P+N    +L  N  T
Sbjct: 21  VPLSPYLSPTVLLLVSCDLGFVRADRPPSPVNVTVTHLRANSAT 64


>AY358136-1|AAQ88503.1|  234|Homo sapiens PSGC6389 protein.
          Length = 234

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 241 LPTRQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 372
           +P   YL  TV+ ++   L  +  +RPP P+N    +L  N  T
Sbjct: 21  VPLSPYLSPTVLLLVSCDLGFVRADRPPSPVNVTVTHLRANSAT 64


>AK026015-1|BAB15321.1|  234|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22362 fis, clone HRC06544. ).
          Length = 234

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 241 LPTRQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 372
           +P   YL  TV+ ++   L  +  +RPP P+N    +L  N  T
Sbjct: 21  VPLSPYLSPTVLLLVSCDLGFVRADRPPSPVNVTVTHLRANSAT 64


>AC074117-2|AAY14849.1|  234|Homo sapiens unknown protein.
          Length = 234

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 241 LPTRQYLDQTVVPILLQGLSALAKERPPDPINYLAAYLLKNKTT 372
           +P   YL  TV+ ++   L  +  +RPP P+N    +L  N  T
Sbjct: 21  VPLSPYLSPTVLLLVSCDLGFVRADRPPSPVNVTVTHLRANSAT 64


>AB065580-1|BAC05810.1|  346|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 346

 Score = 31.1 bits (67), Expect = 4.7
 Identities = 23/83 (27%), Positives = 38/83 (45%)
 Frame = -3

Query: 634 LSTIVYICIL*GKLVYIF*SVK**NYKI*AIYTIVIRCLCHQMSVQQNVSSHCFEISYFH 455
           +S  VY+C+     V ++ SV         +Y  V  C+C  +SV   +  +   IS + 
Sbjct: 67  ISVCVYLCLCVCVSVCVYVSV--------CMYLCVFLCVCVYVSVSVCLCVY-LHISVYL 117

Query: 454 CLHYNKAILMFVGLLVDYCYCLS 386
           C++    + + V L V  C CLS
Sbjct: 118 CVYVCICVCVSVSLCVSVCACLS 140


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,480,542
Number of Sequences: 237096
Number of extensions: 2036096
Number of successful extensions: 3347
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3341
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -