Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_J07
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    26   0.25 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   3.1  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   5.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   5.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   5.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.4  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   7.2  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +2

Query: 149 DYINKXWAERGSPNKMSITA--QSGRAWTENPD 241
           DY  + W ++G+PN   I      GRAW  + D
Sbjct: 269 DYQVRYWLQKGAPNNKLILGIPAYGRAWKMDED 301


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = -1

Query: 105 SLTENFPSTXTGTTVFATRLERGTXKSRGER 13
           S  E+FP     + VFA   E  T    G R
Sbjct: 144 SFIESFPDKYVDSKVFAKAREEATVVPEGSR 174


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -1

Query: 534 IVSTCSILGVRVYLGSL 484
           ++S C+ +GVR+Y+ ++
Sbjct: 98  MISRCNAVGVRIYVDTV 114


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -1

Query: 534 IVSTCSILGVRVYLGSL 484
           ++S C+ +GVR+Y+ ++
Sbjct: 99  MISRCNAVGVRIYVDTV 115


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -1

Query: 534 IVSTCSILGVRVYLGSL 484
           ++S C+ +GVR+Y+ ++
Sbjct: 99  MISRCNAVGVRIYVDTV 115


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 429 TLIFSFCECAMSS 391
           T++FSFC C  +S
Sbjct: 267 TIVFSFCYCYYNS 279


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 58  KNGGSCXSAWKIFSQAC 108
           KNGG+C    K F   C
Sbjct: 154 KNGGTCQDLGKTFMCRC 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,563
Number of Sequences: 336
Number of extensions: 2780
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)