Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_J07
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118368-1|AAM48397.1|  478|Drosophila melanogaster RE11562p pro...   218   5e-57
AE013599-97|AAF57318.2|  478|Drosophila melanogaster CG17337-PA ...   218   5e-57

>AY118368-1|AAM48397.1|  478|Drosophila melanogaster RE11562p
           protein.
          Length = 478

 Score =  218 bits (533), Expect = 5e-57
 Identities = 98/146 (67%), Positives = 121/146 (82%), Gaps = 1/146 (0%)
 Frame = +2

Query: 56  AKTVVPVKVLGKFSVRLVPNQSPEXVEQLVFDYINKXWAERGSPNKMSITAQS-GRAWTE 232
           AKTV+P KV+GKFS+RLVPNQ P+ +E+ V  Y+N  WAERGSPNKM +T  S G+ WTE
Sbjct: 333 AKTVIPKKVIGKFSIRLVPNQDPKHIEECVVKYLNDKWAERGSPNKMKVTMLSAGKPWTE 392

Query: 233 NPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQ 412
           +P+HPHY+AA RA K ++  +PDM+REGGSIPVT+TLQEA+GKNV+L+P+GA DD AHSQ
Sbjct: 393 DPNHPHYEAAKRAIKHVFNVEPDMTREGGSIPVTLTLQEATGKNVILVPVGACDDGAHSQ 452

Query: 413 NEKINVRNYIEGIKLFAAYLFEVGKL 490
           NEKI++ NYIEG KL  AYL EVGKL
Sbjct: 453 NEKIDIYNYIEGTKLLGAYLHEVGKL 478


>AE013599-97|AAF57318.2|  478|Drosophila melanogaster CG17337-PA
           protein.
          Length = 478

 Score =  218 bits (533), Expect = 5e-57
 Identities = 98/146 (67%), Positives = 121/146 (82%), Gaps = 1/146 (0%)
 Frame = +2

Query: 56  AKTVVPVKVLGKFSVRLVPNQSPEXVEQLVFDYINKXWAERGSPNKMSITAQS-GRAWTE 232
           AKTV+P KV+GKFS+RLVPNQ P+ +E+ V  Y+N  WAERGSPNKM +T  S G+ WTE
Sbjct: 333 AKTVIPKKVIGKFSIRLVPNQDPKHIEECVVKYLNDKWAERGSPNKMKVTMLSAGKPWTE 392

Query: 233 NPDHPHYQAAARATKLIYQTDPDMSREGGSIPVTITLQEASGKNVLLLPMGAGDDMAHSQ 412
           +P+HPHY+AA RA K ++  +PDM+REGGSIPVT+TLQEA+GKNV+L+P+GA DD AHSQ
Sbjct: 393 DPNHPHYEAAKRAIKHVFNVEPDMTREGGSIPVTLTLQEATGKNVILVPVGACDDGAHSQ 452

Query: 413 NEKINVRNYIEGIKLFAAYLFEVGKL 490
           NEKI++ NYIEG KL  AYL EVGKL
Sbjct: 453 NEKIDIYNYIEGTKLLGAYLHEVGKL 478


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,181,076
Number of Sequences: 53049
Number of extensions: 565105
Number of successful extensions: 1362
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)