Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_J05
         (814 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY392896-1|AAS85837.1|  124|Homo sapiens immunoglobulin heavy ch...    36   0.13 
AB067218-1|BAC02256.1|  126|Homo sapiens immunoglobulin heavy ch...    33   1.6  
AY393430-1|AAR32482.1|  141|Homo sapiens immunoglobulin heavy ch...    31   3.7  
AB067212-1|BAC02250.1|  125|Homo sapiens immunoglobulin heavy ch...    31   3.7  
DQ100956-1|AAZ08962.1|  120|Homo sapiens immunoglobulin heavy ch...    31   5.0  
AB066876-1|BAC01915.1|  126|Homo sapiens immunoglobulin heavy ch...    31   6.5  
DQ926451-1|ABK81616.1|  120|Homo sapiens immunoglobulin heavy ch...    30   8.7  
AY393041-1|AAS85979.1|  167|Homo sapiens immunoglobulin heavy ch...    30   8.7  
AB067227-1|BAC02265.1|  126|Homo sapiens immunoglobulin heavy ch...    30   8.7  

>AY392896-1|AAS85837.1|  124|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 124

 Score = 36.3 bits (80), Expect = 0.13
 Identities = 28/93 (30%), Positives = 36/93 (38%)
 Frame = +3

Query: 105 LSLECYVCENQXXNNGKCVNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKSCSN 284
           L+L C          G CVN I+         L  I W    Y+S   K +  ISK  S 
Sbjct: 6   LTLTCTFSGFSLSTGGMCVNWIRQPPGKALEWLARIDWDDDKYYSTSLKTRLTISKDTS- 64

Query: 285 KTECPKTRQQNMPLCTYIWYQDWKCSDCCLGDR 383
           K +   T     PL T ++Y    C+  C G R
Sbjct: 65  KNQVVLTMTNMDPLDTAMYY----CARTCSGSR 93


>AB067218-1|BAC02256.1|  126|Homo sapiens immunoglobulin heavy chain
           VHDJ region protein.
          Length = 126

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 24/80 (30%), Positives = 33/80 (41%)
 Frame = +3

Query: 105 LSLECYVCENQXXNNGKCVNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKSCSN 284
           L+L C        N+G CV+ I+         L  I W +  Y+S   K +  ISK  S 
Sbjct: 18  LTLTCTFSGFSLRNSGICVSWIRQPPGKALEWLARINWDNDKYYSTSLKTRLTISKDTS- 76

Query: 285 KTECPKTRQQNMPLCTYIWY 344
           K +   T     PL T  +Y
Sbjct: 77  KNQVTLTVTNADPLDTATYY 96


>AY393430-1|AAR32482.1|  141|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 141

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 23/80 (28%), Positives = 34/80 (42%)
 Frame = +3

Query: 105 LSLECYVCENQXXNNGKCVNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKSCSN 284
           L+L C V       +G CV+ I+         L  I W +  Y++   K ++ ISK  S 
Sbjct: 6   LTLTCTVSGFSLSMSGMCVSWIRQPPGKALEWLAVIDWANDKYFNTSLKTRFTISKDTS- 64

Query: 285 KTECPKTRQQNMPLCTYIWY 344
           K +   T     PL T  +Y
Sbjct: 65  KNQVVLTMTNVDPLDTATYY 84


>AB067212-1|BAC02250.1|  125|Homo sapiens immunoglobulin heavy chain
           VHDJ region protein.
          Length = 125

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
 Frame = +3

Query: 105 LSLECYVCENQXXNNGKCVNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKSCS- 281
           L+L C         +G CVN I+         L  I W    Y+S   K +  ISK  S 
Sbjct: 18  LTLTCTFSGFSLSTSGMCVNWIRQPPGKALEWLARIDWDDDKYYSTSLKTRLTISKDTSK 77

Query: 282 NKTECPKTRQQNMPLCTY 335
           N+     T    +   TY
Sbjct: 78  NQVVLTMTNMDPVDTATY 95


>DQ100956-1|AAZ08962.1|  120|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 120

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
 Frame = +3

Query: 105 LSLECYVCENQXXNNGKCVNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKSCS- 281
           L+L C         NG CV+ I+         L  I W    Y+S   K +  ISK  S 
Sbjct: 17  LTLTCTFSGFSLSTNGMCVSWIRQPPGKALEWLARIDWDGDKYYSTSLKTRLTISKDTSK 76

Query: 282 NKTECPKTRQQNMPLCTY 335
           N+     T    +   TY
Sbjct: 77  NQVVLTVTNMDPVDTATY 94


>AB066876-1|BAC01915.1|  126|Homo sapiens immunoglobulin heavy chain
           VHDJ region protein.
          Length = 126

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
 Frame = +3

Query: 105 LSLECYVCENQXXNNGKCVNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKSCS- 281
           L+L C         +G CVN I+         L  I W    Y+S   K +  ISK  S 
Sbjct: 18  LTLTCTFSGFSLSTSGMCVNWIRLPPGKALEWLARIDWDDDKYYSTSLKTRLSISKDTSK 77

Query: 282 NKTECPKTRQQNMPLCTY 335
           N+     T    +   TY
Sbjct: 78  NQVVLTMTNMDPVDTATY 95


>DQ926451-1|ABK81616.1|  120|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 120

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 25/97 (25%), Positives = 37/97 (38%)
 Frame = +3

Query: 105 LSLECYVCENQXXNNGKCVNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKSCSN 284
           L+L C         +G CV+ I+         L  I WG   Y++   + +  ISK  S 
Sbjct: 18  LTLTCSFSGFSLSTSGMCVSWIRQPPGKALEWLARIDWGDDKYYNTSLRTRLTISKDTSK 77

Query: 285 KTECPKTRQQNMPLCTYIWYQDWKCSDCCLGDRCNYY 395
           K +   T     P+ T  +Y    C+     D   YY
Sbjct: 78  K-QVVLTMTNMDPVDTATYY----CARSYYFDNRGYY 109


>AY393041-1|AAS85979.1|  167|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 167

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 22/78 (28%), Positives = 28/78 (35%), Gaps = 1/78 (1%)
 Frame = +3

Query: 105 LSLECYVCENQXXNNGKCVNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKSCS- 281
           L+L C          G CVN I+         L  I W    Y+S   K +  ISK  S 
Sbjct: 6   LTLTCTFSGFSLSTTGICVNWIRQPPGKALEWLARIDWDDDKYYSTSLKTRLTISKDTSK 65

Query: 282 NKTECPKTRQQNMPLCTY 335
           N+     T    +   TY
Sbjct: 66  NQVVLSMTNMDPVDTATY 83


>AB067227-1|BAC02265.1|  126|Homo sapiens immunoglobulin heavy chain
           VHDJ region protein.
          Length = 126

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 27/101 (26%), Positives = 37/101 (36%)
 Frame = +3

Query: 105 LSLECYVCENQXXNNGKCVNTIKPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKSCSN 284
           L+L C         +G CV+ I+         L  I W    Y+S   K +  ISK  S 
Sbjct: 18  LTLTCSFSGFSLSTSGMCVSWIRQPPGKALEWLARIDWDDDKYYSTSLKTRLTISKDTS- 76

Query: 285 KTECPKTRQQNMPLCTYIWYQDWKCSDCCLGDRCNYYIISG 407
           K +   T     P+ T  +Y      D   G   N + I G
Sbjct: 77  KNQVVLTMANMDPVDTATYYCARLSFDILTGFAINAFDIWG 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,373,911
Number of Sequences: 237096
Number of extensions: 2030789
Number of successful extensions: 3492
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3488
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)