Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_J05
         (814 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98877-12|CAB63409.1|  528|Caenorhabditis elegans Hypothetical p...    31   0.98 
U00065-2|AAL27237.1|  672|Caenorhabditis elegans Prion-like-(q/n...    30   2.3  
AF016427-6|AAY86198.1|  177|Caenorhabditis elegans Hypothetical ...    29   3.0  
U88308-11|AAB42321.1|  154|Caenorhabditis elegans Hypothetical p...    29   4.0  
Z81136-3|CAD27610.1|  196|Caenorhabditis elegans Hypothetical pr...    29   5.2  
AF324055-1|AAK01416.1|  151|Caenorhabditis elegans Ly-6-related ...    29   5.2  

>Z98877-12|CAB63409.1|  528|Caenorhabditis elegans Hypothetical
           protein Y69H2.12 protein.
          Length = 528

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +3

Query: 321 PLCTYIWYQDWKCSDCCLGDRCNY 392
           PLC   WY D  C   C GD   Y
Sbjct: 269 PLCNTSWYMDGDCKKSCGGDSAEY 292


>U00065-2|AAL27237.1|  672|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 25
           protein.
          Length = 672

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
 Frame = +3

Query: 132 NQXXNNGKCVNTI--KPCEHNQDVCLTEIRWGSTPYWSQGAKKQYYISKS-C-SNKTECP 299
           N    N  CV+T     C  NQ VC++   +      SQ    Q  +S S C S+  +CP
Sbjct: 367 NAVCTNNICVSTFCSVSCSTNQ-VCISNQCYNYVSIGSQCVGSQQCLSNSQCISSICQCP 425

Query: 300 KTRQQNMPLCT 332
           +  QQ+  +CT
Sbjct: 426 QGTQQSNGVCT 436


>AF016427-6|AAY86198.1|  177|Caenorhabditis elegans Hypothetical
           protein F32D1.11 protein.
          Length = 177

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 108 SLECYVCENQXXNNGKCVNTIKPCEHN 188
           + ECY C  +   NG C++    CE++
Sbjct: 17  AFECYTCNEELTKNGPCIDRKTICENS 43


>U88308-11|AAB42321.1|  154|Caenorhabditis elegans Hypothetical
           protein C32E8.1 protein.
          Length = 154

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 90  SFLXVLSLECYVCENQXXNNGKCVNTIKPCEH 185
           S L  L +EC +C  Q  ++G  V  + PC H
Sbjct: 79  SDLKTLPIECEICAVQYGDSGMTVPRVLPCGH 110


>Z81136-3|CAD27610.1|  196|Caenorhabditis elegans Hypothetical
           protein W02B8.5 protein.
          Length = 196

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 369 CLGDRCNYYIISGSRQNMPFNRIILGLTSV 458
           CLGDRCN  I + + Q++    I++ L+S+
Sbjct: 165 CLGDRCNSAISTSNCQSLSVLAILVALSSL 194


>AF324055-1|AAK01416.1|  151|Caenorhabditis elegans Ly-6-related
           protein HOT-3 protein.
          Length = 151

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 369 CLGDRCNYYIISGSRQNMPFNRIILGLTSV 458
           CLGDRCN  I + + Q++    I++ L+S+
Sbjct: 120 CLGDRCNSAISTSNCQSLSVLAILVALSSL 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,896,323
Number of Sequences: 27780
Number of extensions: 336686
Number of successful extensions: 836
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)